RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA615175" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA615175 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27567121 27567121 PRJNA615175_P_NODE_24824_length_272_cov_3.688442_g24656_i0 PRJNA615175 24824 272 3.688442 10.03256224 Opisthokonta 33154 Annelida Annelida 115 1.25e-30   NR KAK2144053.1 53620 g24656 i0 66.3 6.86029411764706 89 29 97.1 1 271 8 57 145 KAK2144053.1 hypothetical protein LSH36_790g00016 [Paralvinella palmiformis] diamond 1866 115 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29227917 29227917 PRJNA615175_P_NODE_21529_length_297_cov_2.915179_g21361_i0 PRJNA615175 21529 297 2.915179 8.65808163 Pectinaria gouldii 260746 Annelida Annelida 114 1.63e-30   NR ACJ09354.1 260746 g21361 i0 72.6 34.1717171717172 84 23 84.8 0 254 3 1 84 ACJ09354.1 hypothetical protein [Pectinaria gouldii] diamond 10149 114 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Pectinariidae Pectinaria Pectinaria gouldii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;