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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA613025" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA613025 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14620828 14620828 PRJNA613025_S_NODE_27012_length_179_cov_1.176923_g26858_i0 PRJNA613025 27012 179 1.176923 2.10669217 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 99.4 5.87e-24   NR KAL0590341.1 65357 g26858 i0 87.9 2.91620111731844 58 7 97.2 0 178 5 58 115 KAL0590341.1 hypothetical protein ABG067_001587 [Albugo candida] diamond 522 99.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
22268846 22268846 PRJNA613025_S_NODE_19318_length_226_cov_1.440678_g19164_i0 PRJNA613025 19318 226 1.440678 3.25593228 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 119 2.7699999999999997e-30   NR KAF1336496.1 82926 g19164 i0 81.1 5.8938053097345096 74 14 98.2 0 5 226 80 153 KAF1336496.1 60s ribosomal protein, partial [Globisporangium splendens] diamond 1332 120 0.991666666666667 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
27567118 27567118 PRJNA613025_S_NODE_29784_length_168_cov_1.285714_g29630_i0 PRJNA613025 29784 168 1.285714 2.15999952 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 56.6 5.16e-8   NR KAG7396252.1 109152 g29630 i0 83.3 6.42857142857143 30 5 53.6 0 166 77 142 171 KAG7396252.1 hypothetical protein PHYBOEH_002570 [Phytophthora boehmeriae] diamond 1080 56.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
29051400 29051400 PRJNA613025_S_NODE_32128_length_164_cov_0.886957_g31974_i0 PRJNA613025 32128 164 0.886957 1.45460948 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 48.5 1.17e-4   NR TMW68563.1 41045 g31974 i0 52.3 3.6219512195122 44 21 80.5 0 156 25 2393 2436 TMW68563.1 hypothetical protein Poli38472_006031 [Pythium oligandrum] diamond 594 48.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29209240 29209240 PRJNA613025_S_NODE_25749_length_185_cov_1.095588_g25595_i0 PRJNA613025 25749 185 1.095588 2.0268378 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 87 5.48e-20   NR KAG1703166.1 4784 g25595 i0 71 7.03783783783784 62 17 98.9 1 184 2 19 80 KAG1703166.1 hypothetical protein DVH05_008077 [Phytophthora capsici] diamond 1302 87.8 0.990888382687927 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
30820047 30820047 PRJNA613025_S_NODE_28934_length_171_cov_1.254098_g28780_i0 PRJNA613025 28934 171 1.254098 2.14450758 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 99 3.58e-25   NR XP_067789141.1 4785 g28780 i0 83 13.2280701754386 53 9 93 0 164 6 30 82 XP_067789141.1 40S ribosomal protein S10 [Phytophthora cinnamomi] diamond 2262 99 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
32071754 32071754 PRJNA613025_S_NODE_25518_length_186_cov_1.109489_g25364_i0 PRJNA613025 25518 186 1.109489 2.06364954 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.6e-8   NR KAG9404282.1 112091 g25364 i0 73.5 1.09677419354839 34 9 54.8 0 185 84 290 323 KAG9404282.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Aphanomyces cochlioides] diamond 204 59.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;