RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA613025" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA613025 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9519922 9519922 PRJNA613025_S_NODE_15168_length_276_cov_2.312775_g15014_i0 PRJNA613025 15168 276 2.312775 6.383259 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 147 1.3899999999999996e-42   NR XP_027041682.1 46731 g15014 i0 76.9 7.93478260869565 91 21 98.9 0 276 4 24 114 XP_027041682.1 40S ribosomal protein S8-like [Pocillopora damicornis] diamond 2190 148 0.993243243243243 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
28766990 28766990 PRJNA613025_S_NODE_26947_length_179_cov_1.530769_g26793_i0 PRJNA613025 26947 179 1.530769 2.74007651 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 74.7 1.61e-15   NR XP_028401732.1 151771 g26793 i0 68.6 3.3854748603352 51 16 85.5 0 27 179 3 53 XP_028401732.1 60S ribosomal protein L33-A-like [Dendronephthya gigantea] diamond 606 74.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
31534208 31534208 PRJNA613025_S_NODE_28936_length_171_cov_1.254098_g28782_i0 PRJNA613025 28936 171 1.254098 2.14450758 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 5.88e-7   NR XP_028401732.1 151771 g28782 i0 56.4 6.56140350877193 55 20 96.5 2 6 170 24 74 XP_028401732.1 60S ribosomal protein L33-A-like [Dendronephthya gigantea] diamond 1122 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;