RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA613025" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA613025 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27030014 27030014 PRJNA613025_S_NODE_25722_length_185_cov_1.125000_g25568_i0 PRJNA613025 25722 185 1.125 2.08125 PVC group 1783257 Bacteria Bacteria 120 5.9099999999999994e-30   NR WP_119358895.1 2026184 g25568 i0 83.6 5.91891891891892 61 10 98.9 0 183 1 160 220 WP_119358895.1 phosphoenolpyruvate carboxykinase (GTP) [Meiothermus luteus] diamond 1095 120 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus luteus
30048514 30048514 PRJNA613025_S_NODE_18131_length_237_cov_2.664894_g17977_i0 PRJNA613025 18131 237 2.664894 6.31579878 Trueperaceae bacterium 2026798 Bacteria Bacteria 139 3.4e-39   NR MDF1523506.1 2026798 g17977 i0 83.3 0.987341772151899 78 13 98.7 0 236 3 33 110 MDF1523506.1 C-terminal helicase domain-containing protein [Trueperaceae bacterium] diamond 234 139 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;