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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA611476" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA611476 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12068750 12068750 PRJNA611476_P_NODE_35010_length_354_cov_1.580071_g34219_i0 PRJNA611476 35010 354 1.580071 5.59345134 Chthonomonadales bacterium 2282151 Bacteria Bacteria 84 3.32e-18   NR MCC6729695.1 2282151 g34219 i0 50.5 1.60169491525424 95 46 80.5 1 60 344 14 107 MCC6729695.1 Dabb family protein [Chthonomonadales bacterium] diamond 567 84 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
23542316 23542316 PRJNA611476_P_NODE_70199_length_266_cov_1.357513_g69408_i0 PRJNA611476 70199 266 1.357513 3.6109845800000002 root 1 Root_unresolved Root_unresolved 149 4.26e-40   NR WP_016481560.1 454171 g69408 i0 79.5 16.8496240601504 88 18 99.2 0 2 265 449 536 WP_016481560.1 glucose-6-phosphate isomerase [Chthonomonas calidirosea] diamond 4482 149 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
27174847 27174847 PRJNA611476_P_NODE_71762_length_263_cov_1.215789_g70971_i0 PRJNA611476 71762 263 1.215789 3.19752507 Armatimonadota bacterium 2033014 Bacteria Bacteria 73.9 4.93e-13   NR MDQ7850862.1 2033014 g70971 i0 61.8 0.627376425855513 55 21 62.7 0 178 14 1 55 MDQ7850862.1 hypothetical protein [Armatimonadota bacterium] diamond 165 73.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27269811 27269811 PRJNA611476_P_NODE_71843_length_263_cov_1.215789_g71052_i0 PRJNA611476 71843 263 1.215789 3.19752507 Armatimonadota bacterium 2033014 Bacteria Bacteria 87 1.25e-17   NR MCL5283481.1 2033014 g71052 i0 55.4 0.741444866920152 65 29 74.1 0 68 262 675 739 MCL5283481.1 cellulase family glycosylhydrolase [Armatimonadota bacterium] diamond 195 87 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27378009 27378009 PRJNA611476_P_NODE_116843_length_241_cov_0.916667_g116052_i0 PRJNA611476 116843 241 0.916667 2.20916747 Bacillati 1783272 Bacteria Bacteria 84.3 3.43e-17   NR MBM3459046.1 2033014 g116052 i0 61.6 4.50622406639004 73 28 90.9 0 1 219 252 324 MBM3459046.1 tryptophan--tRNA ligase [Armatimonadota bacterium] diamond 1086 84.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27396485 27396485 PRJNA611476_P_NODE_86743_length_249_cov_0.875000_g85952_i0 PRJNA611476 86743 249 0.875 2.17875 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.7 0.0391   NR MBI5831086.1 2033014 g85952 i0 46.7 0.542168674698795 45 24 54.2 0 248 114 353 397 MBI5831086.1 2-isopropylmalate synthase [Armatimonadota bacterium] diamond 135 42.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28785324 28785324 PRJNA611476_P_NODE_21727_length_429_cov_1.839888_g20936_i0 PRJNA611476 21727 429 1.839888 7.89311952 Chthonomonadales bacterium 2282151 Bacteria Bacteria 97.1 1.42e-20   NR HSV72461.1 2282151 g20936 i0 43.1 2.87412587412587 137 61 93 4 8 406 195 318 HSV72461.1 hypothetical protein [Chthonomonadales bacterium] diamond 1233 97.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
29227802 29227802 PRJNA611476_P_NODE_51449_length_304_cov_1.333333_g50658_i0 PRJNA611476 51449 304 1.333333 4.05333232 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 129 2.1999999999999994e-32   NR WP_025227446.1 1005039 g50658 i0 59.6 0.976973684210526 99 40 97.7 0 299 3 297 395 WP_025227446.1 hypothetical protein [Fimbriimonas ginsengisoli] diamond 297 129 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
29227807 29227807 PRJNA611476_P_NODE_55069_length_295_cov_1.040541_g54278_i0 PRJNA611476 55069 295 1.040541 3.06959595 Armatimonadota bacterium 2033014 Bacteria Bacteria 76.6 8.74e-14   NR MCD6350765.1 2033014 g54278 i0 41.5 0.955932203389831 94 52 93.6 2 277 2 740 832 MCD6350765.1 discoidin domain-containing protein [Armatimonadota bacterium] diamond 282 76.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29764166 29764166 PRJNA611476_P_NODE_9991_length_617_cov_0.952206_g9207_i0 PRJNA611476 9991 617 0.952206 5.87511102 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 99.4 3.2e-20   NR HZT42531.1 2739509 g9207 i0 48.7 0.568881685575365 117 46 56.4 5 362 15 401 504 HZT42531.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 351 99.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
30174885 30174885 PRJNA611476_P_NODE_108672_length_243_cov_0.905882_g107881_i0 PRJNA611476 108672 243 0.905882 2.20129326 Fimbriimonas sp. 1936159 Bacteria Bacteria 53.9 4.31e-6   NR MDR3688683.1 1936159 g107881 i0 44.4 0.777777777777778 63 35 77.8 0 242 54 880 942 MDR3688683.1 DUF4062 domain-containing protein [Fimbriimonas sp.] diamond 189 53.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
30901783 30901783 PRJNA611476_P_NODE_87914_length_249_cov_0.875000_g87123_i0 PRJNA611476 87914 249 0.875 2.17875 Chthonomonas sp. 2282153 Bacteria Bacteria 91.3 1.32e-21   NR MBL8047619.1 2282153 g87123 i0 66.7 0.795180722891566 66 22 79.5 0 247 50 48 113 MBL8047619.1 hypothetical protein [Chthonomonas sp.] diamond 198 91.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas sp.
31692066 31692066 PRJNA611476_P_NODE_53877_length_298_cov_1.026667_g53086_i0 PRJNA611476 53877 298 1.026667 3.05946766 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 89.4 2.88e-18   NR HZT42531.1 2739509 g53086 i0 42.9 0.986577181208054 98 51 98.7 2 3 296 164 256 HZT42531.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 294 89.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31723598 31723598 PRJNA611476_P_NODE_105597_length_244_cov_0.900585_g104806_i0 PRJNA611476 105597 244 0.900585 2.1974274 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 64.7 6.32e-10   NR HZT43825.1 2739509 g104806 i0 44 1.74590163934426 75 38 87.3 3 234 22 41 115 HZT43825.1 GDSL-type esterase/lipase family protein [Chthonomonadaceae bacterium] diamond 426 64.7 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31755263 31755263 PRJNA611476_P_NODE_118517_length_240_cov_2.119760_g117726_i0 PRJNA611476 118517 240 2.11976 5.087424 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.6 8.53e-15   NR HEY3267294.1 2033014 g117726 i0 48 1.85 75 39 93.8 0 15 239 102 176 HEY3267294.1 DUF5127 domain-containing protein [Armatimonadota bacterium] diamond 444 78.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32293570 32293570 PRJNA611476_P_NODE_36559_length_348_cov_1.956364_g35768_i0 PRJNA611476 36559 348 1.956364 6.80814672 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 76.3 2.01e-13   NR MCW3096097.1 2739509 g35768 i0 63 0.991379310344828 54 20 46.6 0 157 318 27 80 MCW3096097.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 345 76.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32293612 32293612 PRJNA611476_P_NODE_81539_length_250_cov_1.734463_g80748_i0 PRJNA611476 81539 250 1.734463 4.3361575 Armatimonadota bacterium 2033014 Bacteria Bacteria 43.1 0.0282   NR HEY3283252.1 2033014 g80748 i0 38.3 0.72 60 33 72 1 3 182 165 220 HEY3283252.1 S41 family peptidase [Armatimonadota bacterium] diamond 180 43.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;