RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA609258" and tax_phylum = "Rotifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9516225 9516225 PRJNA609258_P_NODE_54328_length_248_cov_0.891429_g53943_i0 PRJNA609258 54328 248 0.891429 2.21074392 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 166 3.03e-48   NR CAF0850947.1 104777 g53943 i0 98.8 0.991935483870968 82 1 99.2 0 247 2 71 152 CAF0850947.1 unnamed protein product [Brachionus calyciflorus] diamond 246 166 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
10792010 10792010 PRJNA609258_P_NODE_52669_length_250_cov_0.881356_g52284_i0 PRJNA609258 52669 250 0.881356 2.20339 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 75.5 1.24e-13   NR CAF0869791.1 104777 g52284 i0 70.9 0.66 55 16 66 0 244 80 1548 1602 CAF0869791.1 unnamed protein product [Brachionus calyciflorus] diamond 165 75.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
15890518 15890518 PRJNA609258_P_NODE_46053_length_265_cov_1.619792_g45668_i0 PRJNA609258 46053 265 1.619792 4.2924488 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 169 2.19e-50   NR CAF0792993.1 104777 g45668 i0 94.2 0.973584905660377 86 5 97.4 0 265 8 193 278 CAF0792993.1 unnamed protein product [Brachionus calyciflorus] diamond 258 169 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
22264144 22264144 PRJNA609258_P_NODE_29378_length_345_cov_1.147059_g28993_i0 PRJNA609258 29378 345 1.147059 3.95735355 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 157 4.29e-43   NR CAF1074475.1 104777 g28993 i0 80.9 0.956521739130435 110 16 92.2 2 319 2 1 109 CAF1074475.1 unnamed protein product [Brachionus calyciflorus] diamond 330 157 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
26605084 26605084 PRJNA609258_P_NODE_13041_length_537_cov_2.661638_g12663_i0 PRJNA609258 13041 537 2.661638 14.29299606 Brachionus plicatilis 10195 Rotifera other_Eukaryota 162 1.1399999999999996e-43   NR RNA34527.1 10195 g12663 i0 47.2 0.994413407821229 178 83 93.3 3 13 513 1 178 RNA34527.1 transmembrane protease serine 9-like [Brachionus plicatilis] diamond 534 162 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
26605101 26605101 PRJNA609258_P_NODE_42661_length_279_cov_1.334951_g42276_i0 PRJNA609258 42661 279 1.334951 3.72451329 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 47.8 9.7e-4   NR CAF0773743.1 104777 g42276 i0 43.5 0.666666666666667 62 28 66.7 1 9 194 3 57 CAF0773743.1 unnamed protein product [Brachionus calyciflorus] diamond 186 47.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
26890556 26890556 PRJNA609258_P_NODE_53441_length_249_cov_0.886364_g53056_i0 PRJNA609258 53441 249 0.886364 2.20704636 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 55.5 1.37e-6   NR CAF0915756.1 104777 g53056 i0 38.5 3.97590361445783 78 45 94 2 249 16 294 368 CAF0915756.1 unnamed protein product [Brachionus calyciflorus] diamond 990 55.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27364922 27364922 PRJNA609258_P_NODE_56263_length_246_cov_0.901734_g55878_i0 PRJNA609258 56263 246 0.901734 2.21826564 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 149 4.42e-41   NR CAF0706124.1 104777 g55878 i0 90.1 10.8658536585366 81 8 98.8 0 245 3 130 210 CAF0706124.1 unnamed protein product [Brachionus calyciflorus] diamond 2673 149 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27491025 27491025 PRJNA609258_P_NODE_50883_length_252_cov_0.871508_g50498_i0 PRJNA609258 50883 252 0.871508 2.19620016 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 84.7 3.73e-17   NR CAF0793529.1 104777 g50498 i0 64 0.892857142857143 75 18 82.1 2 224 18 229 300 CAF0793529.1 unnamed protein product [Brachionus calyciflorus] diamond 225 84.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27522446 27522446 PRJNA609258_P_NODE_53563_length_249_cov_0.886364_g53178_i0 PRJNA609258 53563 249 0.886364 2.20704636 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 118 8.29e-29   NR CAF0809066.1 104777 g53178 i0 75.7 0.843373493975904 70 17 84.3 0 3 212 470 539 CAF0809066.1 unnamed protein product [Brachionus calyciflorus] diamond 210 118 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27693793 27693793 PRJNA609258_P_NODE_53624_length_249_cov_0.886364_g53239_i0 PRJNA609258 53624 249 0.886364 2.20704636 Brachionus 10194 Rotifera other_Eukaryota 126 2.17e-34   NR RNA44289.1 10195 g53239 i0 72.3 4.21686746987952 83 23 100 0 249 1 114 196 RNA44289.1 neuronal calcium sensor 2-like [Brachionus plicatilis] diamond 1050 127 0.992125984251969 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27806896 27806896 PRJNA609258_P_NODE_43144_length_277_cov_1.397059_g42759_i0 PRJNA609258 43144 277 1.397059 3.86985343 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 46.6 0.00169   NR CAF0950857.1 104777 g42759 i0 32.5 1.87364620938628 83 52 85.6 1 26 262 91 173 CAF0950857.1 unnamed protein product [Brachionus calyciflorus] diamond 519 46.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28027777 28027777 PRJNA609258_P_NODE_41385_length_284_cov_1.478673_g41000_i0 PRJNA609258 41385 284 1.478673 4.19943132 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 156 8.61e-42   NR CAF0725818.1 104777 g41000 i0 81.1 1.00352112676056 95 17 99.3 1 2 283 4325 4419 CAF0725818.1 unnamed protein product [Brachionus calyciflorus] diamond 285 156 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
28848398 28848398 PRJNA609258_P_NODE_39908_length_290_cov_2.253456_g39523_i0 PRJNA609258 39908 290 2.253456 6.5350224 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 119 2.92e-29   NR CAF0742505.1 104777 g39523 i0 57.9 1.17931034482759 114 14 82.8 1 289 50 117 230 CAF0742505.1 unnamed protein product [Brachionus calyciflorus] diamond 342 119 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29164585 29164585 PRJNA609258_P_NODE_54289_length_248_cov_0.891429_g53904_i0 PRJNA609258 54289 248 0.891429 2.21074392 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 65.9 1.41e-10   NR CAF0956495.1 104777 g53904 i0 48.6 0.895161290322581 74 24 72.6 1 7 186 165 238 CAF0956495.1 unnamed protein product, partial [Brachionus calyciflorus] diamond 222 65.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29258823 29258823 PRJNA609258_P_NODE_56549_length_246_cov_0.901734_g56164_i0 PRJNA609258 56549 246 0.901734 2.21826564 Brachionus plicatilis 10195 Rotifera other_Eukaryota 112 9.47e-27   NR RNA14329.1 10195 g56164 i0 55.7 1.92682926829268 79 35 96.3 0 10 246 190 268 RNA14329.1 DD3-3-like [Brachionus plicatilis] diamond 474 112 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29322141 29322141 PRJNA609258_P_NODE_52269_length_250_cov_0.881356_g51884_i0 PRJNA609258 52269 250 0.881356 2.20339 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 67.8 5.85e-11   NR CAF1021272.1 104777 g51884 i0 56.7 0.804 67 26 80.4 1 203 3 1 64 CAF1021272.1 unnamed protein product [Brachionus calyciflorus] diamond 201 67.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29556229 29556229 PRJNA609258_P_NODE_56170_length_246_cov_0.901734_g55785_i0 PRJNA609258 56170 246 0.901734 2.21826564 Brachionus 10194 Rotifera other_Eukaryota 141 8.14e-39   NR RNA34317.1 10195 g55785 i0 81.3 1.95121951219512 80 15 97.6 0 241 2 27 106 RNA34317.1 glycerol-3-phosphate dehydrogenase [NAD(+)] cytoplasmic [Brachionus plicatilis] diamond 480 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29700732 29700732 PRJNA609258_P_NODE_25230_length_375_cov_1.437086_g24846_i0 PRJNA609258 25230 375 1.437086 5.3890725 Brachionus plicatilis 10195 Rotifera other_Eukaryota 157 5.49e-43   NR RNA25572.1 10195 g24846 i0 57.3 0.936 117 50 93.6 0 3 353 106 222 RNA25572.1 cysteine-rich venom Mr30-like [Brachionus plicatilis] diamond 351 157 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29953808 29953808 PRJNA609258_P_NODE_52531_length_250_cov_0.881356_g52146_i0 PRJNA609258 52531 250 0.881356 2.20339 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 129 4.33e-33   NR CAF0796002.1 104777 g52146 i0 67.5 0.96 80 26 96 0 242 3 273 352 CAF0796002.1 unnamed protein product [Brachionus calyciflorus] diamond 240 129 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30079963 30079963 PRJNA609258_P_NODE_42672_length_279_cov_1.252427_g42287_i0 PRJNA609258 42672 279 1.252427 3.49427133 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 159 1.59e-44   NR CAF0772535.1 104777 g42287 i0 78 0.978494623655914 91 20 97.8 0 2 274 36 126 CAF0772535.1 unnamed protein product [Brachionus calyciflorus] diamond 273 159 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30333375 30333375 PRJNA609258_P_NODE_50132_length_252_cov_1.357542_g49747_i0 PRJNA609258 50132 252 1.357542 3.42100584 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 125 4.42e-31   NR CAF0742100.1 104777 g49747 i0 65.5 2 84 29 100 0 1 252 319 402 CAF0742100.1 unnamed protein product [Brachionus calyciflorus] diamond 504 125 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
30617153 30617153 PRJNA609258_P_NODE_51433_length_251_cov_0.876404_g51048_i0 PRJNA609258 51433 251 0.876404 2.19977404 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 104 7.66e-27   NR CAF0956792.1 104777 g51048 i0 61.6 0.872509960159363 73 28 87.3 0 219 1 1 73 CAF0956792.1 unnamed protein product [Brachionus calyciflorus] diamond 219 104 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
31547206 31547206 PRJNA609258_P_NODE_56776_length_245_cov_1.616279_g56391_i0 PRJNA609258 56776 245 1.616279 3.95988355 Brachionus 10194 Rotifera other_Eukaryota 73.6 4.52e-13   NR RMZ95824.1 10195 g56391 i0 45.7 6.80816326530612 81 43 98 1 2 241 226 306 RMZ95824.1 hypothetical protein BpHYR1_017282 [Brachionus plicatilis] diamond 1668 73.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
32040054 32040054 PRJNA609258_P_NODE_42898_length_278_cov_1.360976_g42513_i0 PRJNA609258 42898 278 1.360976 3.78351328 Brachionus plicatilis 10195 Rotifera other_Eukaryota 185 4.519999999999998e-56   NR RNA36125.1 10195 g42513 i0 94.4 0.971223021582734 90 5 97.1 0 1 270 22 111 RNA36125.1 guanine nucleotide-binding subunit beta-2-like 1 [Brachionus plicatilis] diamond 270 185 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
32514924 32514924 PRJNA609258_P_NODE_55619_length_247_cov_0.896552_g55234_i0 PRJNA609258 55619 247 0.896552 2.21448344 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 82.8 3.04e-16   NR CAF1004757.1 104777 g55234 i0 52.4 1.02024291497976 84 33 93.5 2 2 232 304 387 CAF1004757.1 unnamed protein product [Brachionus calyciflorus] diamond 252 82.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32672203 32672203 PRJNA609258_P_NODE_40720_length_287_cov_1.364486_g40335_i0 PRJNA609258 40720 287 1.364486 3.91607482 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 178 8.359999999999999e-54   NR CAF0770855.1 104777 g40335 i0 94.7 31.7770034843206 95 5 99.3 0 3 287 45 139 CAF0770855.1 unnamed protein product [Brachionus calyciflorus] diamond 9120 178 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;