RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA609258" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA609258 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22264587 22264587 PRJNA609258_P_NODE_418_length_2018_cov_5.794344_g379_i0 PRJNA609258 418 2018 5.794344 116.92986192 brine shrimp iflavirus 2 2900463 Viruses Viruses 965 0   NR UNI73846.1 2900463 g379 i0 67.7 0.985629335976214 663 207 98.6 3 3 1991 2364 3019 UNI73846.1 MAG: RNA-dependent RNA polymerase [brine shrimp iflavirus 2] diamond 1989 965 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 2
26605090 26605090 PRJNA609258_P_NODE_1_length_7232_cov_13.570191_g0_i0 PRJNA609258 1 7232 13.570191 981.39621312 Zebrafish gut calicivirus RQ08 Viruses Viruses 1524 0   NR XBS25272.1 RQ08 g0 i0 39.9 0.936670353982301 2258 1225 90.8 44 89 6658 10 2203 XBS25272.1 MAG: ORF1 protein [Barramundi calicivirus 1] diamond 6774 1524 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae   Zebrafish gut calicivirus
26985141 26985141 PRJNA609258_P_NODE_4702_length_903_cov_1.701205_g4408_i0 PRJNA609258 4702 903 1.701205 15.36188115 brine shrimp iflavirus 2 2900463 Viruses Viruses 225 1.39e-62   NR UNI73846.1 2900463 g4408 i0 43.8 0.933554817275748 281 147 92 5 46 876 2016 2289 UNI73846.1 MAG: RNA-dependent RNA polymerase [brine shrimp iflavirus 2] diamond 843 225 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 2
27522449 27522449 PRJNA609258_P_NODE_54863_length_247_cov_1.356322_g54478_i0 PRJNA609258 54863 247 1.356322 3.35011534 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 94.4 2.7e-20   NR AVM87439.1 3063761 g54478 i0 60.6 0.801619433198381 66 26 80.2 0 200 3 1065 1130 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 198 94.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
28090770 28090770 PRJNA609258_P_NODE_44525_length_272_cov_1.020101_g44140_i0 PRJNA609258 44525 272 1.020101 2.77467472 brine shrimp iflavirus 2 2900463 Viruses Viruses 132 2.29e-33   NR UNI73846.1 2900463 g44140 i0 64.8 1.00367647058824 91 31 99.3 1 2 271 1630 1720 UNI73846.1 MAG: RNA-dependent RNA polymerase [brine shrimp iflavirus 2] diamond 273 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus brine shrimp iflavirus 2
31153993 31153993 PRJNA609258_P_NODE_21255_length_412_cov_1.684366_g20871_i0 PRJNA609258 21255 412 1.684366 6.93958792 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 119 4.2e-28   NR AVM87439.1 3063761 g20871 i0 55.4 0.735436893203884 101 45 73.5 0 109 411 928 1028 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 303 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;