RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA609258" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA609258 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4415451 4415451 PRJNA609258_P_NODE_54404_length_248_cov_0.891429_g54019_i0 PRJNA609258 54404 248 0.891429 2.21074392 Cylindrospermopsis 77021 Bacteria Bacteria 52.8 1.19e-5   NR WP_218773708.1 77022 g54019 i0 39 3.95564516129032 82 45 96.8 2 7 246 448 526 WP_218773708.1 beta strand repeat-containing protein [Cylindrospermopsis raciborskii] diamond 981 53.1 0.994350282485876 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Cylindrospermopsis Cylindrospermopsis raciborskii
30648605 30648605 PRJNA609258_P_NODE_32573_length_326_cov_1.233202_g32188_i0 PRJNA609258 32573 326 1.233202 4.02023852 Anabaenopsis elenkinii 156213 Bacteria Bacteria 43.5 0.0476   NR WP_200989542.1 156213 g32188 i0 32 0.690184049079755 75 45 66.3 3 35 250 252 323 WP_200989542.1 fatty acid desaturase [Anabaenopsis elenkinii] diamond 225 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nodulariaceae Anabaenopsis Anabaenopsis elenkinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;