RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA608894" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12065118 12065118 PRJNA608894_P_NODE_51910_length_249_cov_0.875000_g51411_i0 PRJNA608894 51910 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 128 7.86e-34   NR XP_004356622.1 1257118 g51411 i0 72 3.98795180722892 82 23 98.8 0 249 4 84 165 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 993 128 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18998447 18998447 PRJNA608894_P_NODE_15195_length_565_cov_2.119919_g14706_i0 PRJNA608894 15195 565 2.119919 11.97754235 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 189 1.11e-58   NR XP_004339588.1 1257118 g14706 i0 87.6 1.10442477876106 105 13 55.8 0 77 391 7 111 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 624 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27187923 27187923 PRJNA608894_P_NODE_42002_length_276_cov_1.453202_g41503_i0 PRJNA608894 42002 276 1.453202 4.01083752 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 97.4 2.5e-21   NR AMN14212.1 5757 g41503 i0 58.3 2.10869565217391 96 35 98.9 3 274 2 248 343 AMN14212.1 sterol 14-alpha-demethylase [Acanthamoeba polyphaga] diamond 582 97.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
28229970 28229970 PRJNA608894_P_NODE_54326_length_247_cov_0.885057_g53827_i0 PRJNA608894 54326 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 9.48e-25   NR XP_004344010.1 1257118 g53827 i0 63.8 3.81376518218623 80 28 97.2 1 241 2 629 707 XP_004344010.1 prolyl oligopeptidase [Acanthamoeba castellanii str. Neff] diamond 942 108 0.990740740740741 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28753853 28753853 PRJNA608894_P_NODE_58707_length_242_cov_1.366864_g58208_i0 PRJNA608894 58707 242 1.366864 3.30781088 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 132 1.61e-35   NR XP_004356622.1 1257118 g58208 i0 80 0.991735537190083 80 16 99.2 0 1 240 142 221 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 240 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29227712 29227712 PRJNA608894_P_NODE_44989_length_266_cov_1.248705_g44490_i0 PRJNA608894 44989 266 1.248705 3.3215553 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 1.88e-24   NR XP_004356622.1 1257118 g44490 i0 60.5 0.857142857142857 76 30 85.7 0 37 264 5 80 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 228 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31850089 31850089 PRJNA608894_P_NODE_49037_length_253_cov_1.666667_g48538_i0 PRJNA608894 49037 253 1.666667 4.21666751 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 3.49e-5   NR XP_004339874.1 1257118 g48538 i0 44.1 1.50592885375494 59 33 70 0 32 208 20 78 XP_004339874.1 Transloconassociated protein subunit gamma, putative [Acanthamoeba castellanii str. Neff] diamond 381 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31850092 31850092 PRJNA608894_P_NODE_50137_length_251_cov_0.865169_g49638_i0 PRJNA608894 50137 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92 1.87e-19   NR XP_004336994.1 1257118 g49638 i0 85.2 0.729083665338645 61 5 68.1 1 251 81 1023 1083 XP_004336994.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Acanthamoeba castellanii str. Neff] diamond 183 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32861188 32861188 PRJNA608894_P_NODE_24120_length_393_cov_2.406250_g23623_i0 PRJNA608894 24120 393 2.40625 9.4565625 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.5 5.57e-15   NR XP_004356622.1 1257118 g23623 i0 80.4 0.351145038167939 46 9 35.1 0 392 255 270 315 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 138 80.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;