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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA608894" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJNA608894 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27016781 27016781 PRJNA608894_P_NODE_46982_length_259_cov_1.655914_g46483_i0 PRJNA608894 46982 259 1.655914 4.28881726 Minisyncoccota bacterium 2053589 Bacteria Bacteria 47.4 6.04e-4   NR MDR3548969.1 2053589 g46483 i0 44.4 0.521235521235521 45 25 52.1 0 30 164 88 132 MDR3548969.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 135 47.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27396362 27396362 PRJNA608894_P_NODE_23423_length_402_cov_2.784195_g22926_i0 PRJNA608894 23423 402 2.784195 11.1924639 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 112 8.1e-26   NR PYM91764.1 2053607 g22926 i0 50 11.1119402985075 106 53 79.1 0 400 83 527 632 PYM91764.1 MAG: propionyl-CoA synthetase [Candidatus Rokuibacteriota bacterium] diamond 4467 112 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27680666 27680666 PRJNA608894_P_NODE_40724_length_280_cov_4.859903_g40225_i0 PRJNA608894 40724 280 4.859903 13.6077284 Patescibacteria group bacterium 2052139 Bacteria Bacteria 59.3 1.81e-8   NR MFA5187061.1 2052139 g40225 i0 42.5 0.857142857142857 80 45 85.7 1 279 40 82 160 MFA5187061.1 glycoside hydrolase family 19 protein [Patescibacteria group bacterium] diamond 240 59.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27743792 27743792 PRJNA608894_P_NODE_48464_length_255_cov_1.214286_g47965_i0 PRJNA608894 48464 255 1.214286 3.0964293 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 120 8.86e-33   NR MBW7954340.1 2044595 g47965 i0 85.1 1.74117647058824 74 11 87.1 0 255 34 57 130 MBW7954340.1 30S ribosomal protein S9 [Candidatus Altimarinota bacterium] diamond 444 120 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28135657 28135657 PRJNA608894_P_NODE_54345_length_247_cov_0.885057_g53846_i0 PRJNA608894 54345 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 79.3 4.09e-15   NR MCS7245191.1 2052148 g53846 i0 49.4 1.96761133603239 81 35 98.4 2 246 4 292 366 MCS7245191.1 ornithine--oxo-acid transaminase [candidate division WOR-3 bacterium] diamond 486 79.7 0.994981179422836 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
28293293 28293293 PRJNA608894_P_NODE_18866_length_477_cov_3.556931_g18370_i0 PRJNA608894 18866 477 3.556931 16.96656087 Bacteria 2 Bacteria Bacteria 113 4.07e-26   NR MBU0613847.1 2052139 g18370 i0 45 10.6729559748428 129 70 80.5 1 466 83 315 443 MBU0613847.1 leucyl aminopeptidase [Patescibacteria group bacterium] diamond 5091 113 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29227706 29227706 PRJNA608894_P_NODE_22769_length_411_cov_3.846154_g22272_i0 PRJNA608894 22769 411 3.846154 15.80769294 Patescibacteria group bacterium 2052139 Bacteria Bacteria 79 2.48e-15   NR MEK7499743.1 2052139 g22272 i0 42.4 0.722627737226277 99 53 72.3 2 330 34 71 165 MEK7499743.1 hypothetical protein [Patescibacteria group bacterium] diamond 297 79 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32166755 32166755 PRJNA608894_P_NODE_31898_length_322_cov_1.236948_g31399_i0 PRJNA608894 31898 322 1.236948 3.98297256 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 73.9 7.98e-14   NR HRP38035.1 2099670 g31399 i0 40 0.791925465838509 85 51 79.2 0 321 67 35 119 HRP38035.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 255 73.9 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
32338161 32338161 PRJNA608894_P_NODE_54919_length_246_cov_0.890173_g54420_i0 PRJNA608894 54919 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 103 5.1999999999999985e-24   NR OJU87479.1 1895829 g54420 i0 89.1 1.34146341463415 55 6 67.1 0 246 82 377 431 OJU87479.1 MAG: GTP1/OBG sub domain protein [Candidatus Saccharibacteria bacterium 49-20] diamond 330 103 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;