RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA608660" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA608660 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27901166 27901166 PRJNA608660_P_NODE_38485_length_194_cov_1.427586_g38129_i0 PRJNA608660 38485 194 1.427586 2.76951684 Dicistroviridae sp. 1955144 Viruses Viruses 86.7 6.61e-18   NR QJI52143.1 1955144 g38129 i0 83.3 0.742268041237113 48 8 74.2 0 51 194 783 830 QJI52143.1 MAG: structural polyprotein [Dicistroviridae sp.] diamond 144 86.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
29258795 29258795 PRJNA608660_P_NODE_19049_length_326_cov_3.000000_g18693_i0 PRJNA608660 19049 326 3 9.78 Colletotrichum gloeosporioides partitivirus 1 2603562 Viruses Viruses 154 6.84e-43   NR QED88096.1 2603562 g18693 i0 72.4 0.966257668711656 105 29 96.6 0 323 9 2 106 QED88096.1 hypothetical protein [Colletotrichum gloeosporioides partitivirus 1] diamond 315 154 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Colletotrichum gloeosporioides partitivirus 1
31818436 31818436 PRJNA608660_P_NODE_18997_length_327_cov_1.482014_g18641_i0 PRJNA608660 18997 327 1.482014 4.84618578 Dicistroviridae sp. 1955144 Viruses Viruses 81.3 3e-15   NR XCO49031.1 1955144 g18641 i0 41 1.8348623853211 100 51 91.7 1 20 319 118 209 XCO49031.1 MAG: putative ORF2 protein [Dicistroviridae sp.] diamond 600 81.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;