contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA608660" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15887420 | 15887420 | PRJNA608660_P_NODE_10353_length_463_cov_13.934783_g10008_i0 | PRJNA608660 | 10353 | 463 | 13.934783 | 64.51804529 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 95.1 | 8.17e-20 | NR | MBN2123032.1 | 2026735 | g10008 | i0 | 48.5 | 4.5939524838013 | 99 | 51 | 64.1 | 0 | 447 | 151 | 159 | 257 | MBN2123032.1 ABC transporter permease [Deltaproteobacteria bacterium] | diamond | 2127 | 95.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 26872101 | 26872101 | PRJNA608660_P_NODE_5061_length_645_cov_4.981544_g4763_i0 | PRJNA608660 | 5061 | 645 | 4.981544 | 32.1309588 | root | 1 | Root_unresolved | Root_unresolved | 47.8 | 0.0125 | NR | MEO8551975.1 | 2212474 | g4763 | i0 | 33.8 | 1.95348837209302 | 74 | 49 | 34.4 | 0 | 47 | 268 | 90 | 163 | MEO8551975.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 1260 | 47.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28406633 | 28406633 | PRJNA608660_P_NODE_34286_length_212_cov_3.073620_g33930_i0 | PRJNA608660 | 34286 | 212 | 3.07362 | 6.5160744 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 65.1 | 3.27e-10 | NR | RLC27457.1 | 2026735 | g33930 | i0 | 53.6 | 1.95283018867925 | 69 | 32 | 97.6 | 0 | 2 | 208 | 694 | 762 | RLC27457.1 MAG: CRISPR-associated endonuclease Cas1 [Deltaproteobacteria bacterium] | diamond | 414 | 65.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28501360 | 28501360 | PRJNA608660_P_NODE_21587_length_299_cov_3.632000_g21231_i0 | PRJNA608660 | 21587 | 299 | 3.632 | 10.859680000000001 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 44.7 | 0.00247 | NR | HNC97725.1 | 2818507 | g21231 | i0 | 40.3 | 0.622073578595318 | 62 | 26 | 51.2 | 1 | 245 | 93 | 17 | 78 | HNC97725.1 hypothetical protein [Myxococcota bacterium] | diamond | 186 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 28501362 | 28501362 | PRJNA608660_P_NODE_29087_length_241_cov_1.604167_g28731_i0 | PRJNA608660 | 29087 | 241 | 1.604167 | 3.86604247 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 99.4 | 3.88e-22 | NR | WP_293259433.1 | 1962667 | g28731 | i0 | 78.5 | 0.983402489626556 | 79 | 16 | 98.3 | 1 | 4 | 240 | 201 | 278 | WP_293259433.1 tetratricopeptide repeat protein [Nannocystis sp.] | diamond | 237 | 99.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 28911425 | 28911425 | PRJNA608660_P_NODE_27188_length_253_cov_2.318627_g26832_i0 | PRJNA608660 | 27188 | 253 | 2.318627 | 5.86612631 | Polyangiaceae bacterium LLY-WYZ-14_1 | 3034331 | Bacteria | Bacteria | 42.4 | 0.0412 | NR | HJK99605.1 | 3034331 | g26832 | i0 | 36.8 | 0.806324110671937 | 68 | 40 | 80.6 | 2 | 239 | 36 | 53 | 117 | HJK99605.1 GNAT family N-acetyltransferase [Polyangiaceae bacterium LLY-WYZ-14_1] | diamond | 204 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium LLY-WYZ-14_1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;