RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA608660" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA608660 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32198213 32198213 PRJNA608660_P_NODE_21498_length_300_cov_2.836653_g21142_i0 PRJNA608660 21498 300 2.836653 8.509959 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 144 2.53e-39   NR MDY0024322.1 3018265 g21142 i0 66.7 4.68 93 31 93 0 16 294 186 278 MDY0024322.1 CTP synthase [Candidatus Izemoplasmatales bacterium] diamond 1404 144 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium
32672177 32672177 PRJNA608660_P_NODE_11840_length_431_cov_22.968586_g11493_i0 PRJNA608660 11840 431 22.968586 98.99460566 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 123 1.56e-32   NR HRY78598.1 3018265 g11493 i0 88.7 0.431554524361949 62 7 43.2 0 18 203 108 169 HRY78598.1 nitroreductase family protein [Candidatus Izemoplasmatales bacterium] diamond 186 123 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;