RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA606583" and tax_phylum = "Arthropoda"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA606583 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28406619 28406619 PRJNA606583_P_NODE_41606_length_153_cov_1.344828_g41177_i0 PRJNA606583 41606 153 1.344828 2.05758684 Coccinella septempunctata 41139 Arthropoda Arthropoda 61.2 1.86e-9   NR XP_044764172.1 41139 g41177 i0 63.3 1.94117647058824 49 11 82.4 2 23 148 128 176 XP_044764172.1 uncharacterized protein LOC123320804 [Coccinella septempunctata] diamond 297 61.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Coccinellidae Coccinella Coccinella septempunctata
30933243 30933243 PRJNA606583_P_NODE_40434_length_156_cov_1.142857_g40005_i0 PRJNA606583 40434 156 1.142857 1.78285692 Timema bartmani 61472 Arthropoda Arthropoda 41.2 0.0113   NR CAD7451667.1 61472 g40005 i0 48.9 0.903846153846154 47 23 88.5 1 3 140 32 78 CAD7451667.1 unnamed protein product [Timema bartmani] diamond 141 41.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema bartmani

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;