RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA606583" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 1 ✖

bioproject 1

  • PRJNA606583 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32811306 32811306 PRJNA606583_P_NODE_35980_length_169_cov_0.969697_g35551_i0 PRJNA606583 35980 169 0.969697 1.63878793 Archaea 2157 Archaea Archaea 43.1 0.00972   NR MDP6912354.1 2670411 g35551 i0 37.5 2.55621301775148 48 30 85.2 0 15 158 240 287 MDP6912354.1 PQQ-binding-like beta-propeller repeat protein [Candidatus Thalassarchaeaceae archaeon] diamond 432 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;