contig_metadata
17 rows where analysis = "diamond", bioproject = "PRJNA605033" and tax_superkingdom = "Archaea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10073213 | 10073213 | PRJNA605033_P_NODE_11388_length_412_cov_2.628647_g9857_i0 | PRJNA605033 | 11388 | 412 | 2.628647 | 10.83002564 | Thermococcus | 2263 | Archaea | Archaea | 256 | 1.69e-78 | NR | MEO2152736.1 | 35749 | g9857 | i0 | 98.5 | 17.8252427184466 | 136 | 2 | 99 | 0 | 3 | 410 | 511 | 646 | MEO2152736.1 DNA polymerase domain-containing protein [Thermococcus sp.] | diamond | 7344 | 256 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Thermococcus | Thermococcus sp. | ||
| 19708237 | 19708237 | PRJNA605033_P_NODE_1576_length_1291_cov_2.747611_g758_i0 | PRJNA605033 | 1576 | 1291 | 2.747611 | 35.47165801 | Thermococcus | 2263 | Archaea | Archaea | 807 | 1.87e-276 | NR | WP_014121997.1 | 246969 | g758 | i0 | 88 | 2.16576297443842 | 466 | 20 | 99.9 | 3 | 2 | 1291 | 1 | 466 | WP_014121997.1 DNA polymerase domain-containing protein [Thermococcus sp. AM4] | diamond | 2796 | 807 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Thermococcus | Thermococcus sp. AM4 | ||
| 22823179 | 22823179 | PRJNA605033_P_NODE_718_length_2342_cov_8.273082_g151_i0 | PRJNA605033 | 718 | 2342 | 8.273082 | 193.75558044 | root | 1 | Root_unresolved | Root_unresolved | 451 | 4.2599999999999984e-148 | NR | MCI0556924.1 | 1971748 | g151 | i0 | 54.6 | 7.47181895815542 | 441 | 192 | 56 | 4 | 325 | 1635 | 17 | 453 | MCI0556924.1 IS110 family transposase [Nitrososphaera sp.] | diamond | 17499 | 454 | 0.993392070484581 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Nitrososphaera sp. | ||
| 24809335 | 24809335 | PRJNA605033_P_NODE_64140_length_222_cov_4.679144_g62571_i0 | PRJNA605033 | 64140 | 222 | 4.679144 | 10.38769968 | Halovenus aranensis | 890420 | Archaea | Archaea | 67.8 | 3.8e-11 | NR | SDJ86709.1 | 890420 | g62571 | i0 | 46.6 | 0.986486486486487 | 73 | 30 | 98.6 | 1 | 220 | 2 | 271 | 334 | SDJ86709.1 Transposase DDE domain-containing protein [Halovenus aranensis] | diamond | 219 | 67.8 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Haloarculaceae | Halovenus | Halovenus aranensis | |
| 26636772 | 26636772 | PRJNA605033_P_NODE_117241_length_222_cov_1.652406_g115672_i0 | PRJNA605033 | 117241 | 222 | 1.652406 | 3.66834132 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 55.1 | 1.23e-6 | NR | MDW3611325.1 | 2169593 | g115672 | i0 | 100 | 0.648648648648649 | 24 | 0 | 32.4 | 0 | 149 | 220 | 282 | 305 | MDW3611325.1 type I glutamate--ammonia ligase [Nitrososphaeraceae archaeon] | diamond | 144 | 55.1 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 26858905 | 26858905 | PRJNA605033_P_NODE_189821_length_170_cov_2.066667_g188252_i0 | PRJNA605033 | 189821 | 170 | 2.066667 | 3.5133339 | Candidatus Pacearchaeota archaeon | 2026773 | Archaea | Archaea | 42 | 0.00447 | NR | MBS3072054.1 | 2026773 | g188252 | i0 | 44.4 | 0.794117647058823 | 45 | 22 | 79.4 | 1 | 150 | 16 | 33 | 74 | MBS3072054.1 hypothetical protein [Candidatus Pacearchaeota archaeon] | diamond | 135 | 42 | 1 | Archaea | Candidatus Pacearchaeota | Nanobdellati | Candidatus Pacearchaeota archaeon | ||||||
| 26935006 | 26935006 | PRJNA605033_P_NODE_153282_length_191_cov_3.147436_g151713_i0 | PRJNA605033 | 153282 | 191 | 3.147436 | 6.01160276 | Thermococcus | 2263 | Archaea | Archaea | 133 | 2.07e-34 | NR | WP_167728776.1 | 163002 | g151713 | i0 | 100 | 4.94764397905759 | 63 | 0 | 99 | 0 | 2 | 190 | 1761 | 1823 | WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] | diamond | 945 | 133 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Thermococcus | Thermococcus sp. 9N3 | ||
| 27396342 | 27396342 | PRJNA605033_P_NODE_77843_length_222_cov_2.604278_g76274_i0 | PRJNA605033 | 77843 | 222 | 2.604278 | 5.78149716 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 50.1 | 8.79e-6 | NR | HEX5977788.1 | 2169593 | g76274 | i0 | 100 | 0.648648648648649 | 24 | 0 | 32.4 | 0 | 220 | 149 | 69 | 92 | HEX5977788.1 hypothetical protein [Nitrososphaeraceae archaeon] | diamond | 144 | 50.1 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 27869582 | 27869582 | PRJNA605033_P_NODE_158365_length_187_cov_4.151316_g156796_i0 | PRJNA605033 | 158365 | 187 | 4.151316 | 7.76296092 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 63.5 | 1.83e-11 | NR | HZA64091.1 | 2169593 | g156796 | i0 | 82.9 | 0.561497326203209 | 35 | 6 | 56.1 | 0 | 45 | 149 | 42 | 76 | HZA64091.1 hypothetical protein [Nitrososphaeraceae archaeon] | diamond | 105 | 63.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 28596069 | 28596069 | PRJNA605033_P_NODE_109247_length_222_cov_1.807487_g107678_i0 | PRJNA605033 | 109247 | 222 | 1.807487 | 4.01262114 | Methanospirillum sp. | 45200 | Archaea | Archaea | 50.1 | 7.37e-5 | NR | MBP9009538.1 | 45200 | g107678 | i0 | 41.1 | 1.97297297297297 | 73 | 20 | 98.6 | 1 | 219 | 1 | 199 | 248 | MBP9009538.1 DNA cytosine methyltransferase [Methanospirillum sp.] | diamond | 438 | 50.1 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Methanomicrobia | Methanomicrobiales | Methanospirillaceae | Methanospirillum | Methanospirillum sp. | |
| 28924711 | 28924711 | PRJNA605033_P_NODE_141988_length_202_cov_1.802395_g140419_i0 | PRJNA605033 | 141988 | 202 | 1.802395 | 3.6408379 | root | 1 | Root_unresolved | Root_unresolved | 94 | 4.569999999999999e-23 | NR | MCI0562201.1 | 1971748 | g140419 | i0 | 84.9 | 1.57425742574257 | 53 | 8 | 78.7 | 0 | 4 | 162 | 53 | 105 | MCI0562201.1 fluoride efflux transporter CrcB [Nitrososphaera sp.] | diamond | 318 | 94 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Nitrososphaera sp. | ||
| 30079911 | 30079911 | PRJNA605033_P_NODE_72492_length_222_cov_2.919786_g70923_i0 | PRJNA605033 | 72492 | 222 | 2.919786 | 6.48192492 | Candidatus Nanoarchaeia archaeon | 2910166 | Archaea | Archaea | 47.8 | 4.65e-4 | NR | HLD15491.1 | 2910166 | g70923 | i0 | 91.7 | 0.324324324324324 | 24 | 2 | 32.4 | 0 | 221 | 150 | 312 | 335 | HLD15491.1 signal recognition particle-docking protein FtsY [Candidatus Nanoarchaeia archaeon] | diamond | 72 | 47.8 | 1 | Archaea | Nanobdellati | Nanobdellota | Candidatus Nanoarchaeia | Candidatus Nanoarchaeia archaeon | |||||
| 30585416 | 30585416 | PRJNA605033_P_NODE_180613_length_174_cov_6.985612_g179044_i0 | PRJNA605033 | 180613 | 174 | 6.985612 | 12.15496488 | Pyrococcus furiosus | 2261 | Archaea | Archaea | 110 | 1.47e-26 | NR | 4AHC_A | 2261 | g179044 | i0 | 96.5 | 0.982758620689655 | 57 | 2 | 98.3 | 0 | 172 | 2 | 131 | 187 | 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] | diamond | 171 | 110 | 1 | Archaea | Methanobacteriati | Methanobacteriota | Thermococci | Thermococcales | Thermococcaceae | Pyrococcus | Pyrococcus furiosus | ||
| 30996390 | 30996390 | PRJNA605033_P_NODE_36874_length_261_cov_1.654867_g35307_i0 | PRJNA605033 | 36874 | 261 | 1.654867 | 4.31920287 | Candidatus Altiarchaeales archaeon | 2250256 | Archaea | Archaea | 60.8 | 1.54e-8 | NR | MBD3260715.1 | 2250256 | g35307 | i0 | 44.8 | 0.770114942528736 | 67 | 31 | 77 | 1 | 202 | 2 | 54 | 114 | MBD3260715.1 IS200/IS605 family element transposase accessory protein TnpB [Candidatus Altiarchaeales archaeon] | diamond | 201 | 60.8 | 1 | Archaea | Nanobdellati | Candidatus Altarchaeota | Candidatus Altiarchaeia | Candidatus Altarchaeales | Candidatus Altiarchaeales archaeon | ||||
| 31547191 | 31547191 | PRJNA605033_P_NODE_26656_length_290_cov_1.635294_g25094_i0 | PRJNA605033 | 26656 | 290 | 1.635294 | 4.7423526 | root | 1 | Root_unresolved | Root_unresolved | 55.8 | 1.61e-6 | NR | TRO47018.1 | 2026714 | g25094 | i0 | 55.8 | 2.23448275862069 | 43 | 19 | 44.5 | 0 | 4 | 132 | 423 | 465 | TRO47018.1 HAD family hydrolase, partial [Candidatus Bathyarchaeota archaeon] | diamond | 648 | 55.8 | 1 | Archaea | Thermoproteati | Candidatus Bathyarchaeota | Candidatus Bathyarchaeota archaeon | ||||||
| 32229986 | 32229986 | PRJNA605033_P_NODE_170558_length_180_cov_1.379310_g168989_i0 | PRJNA605033 | 170558 | 180 | 1.37931 | 2.482758 | Halobaculum sp. | 1891221 | Archaea | Archaea | 40 | 0.0495 | NR | MFB6177911.1 | 1891221 | g168989 | i0 | 35.8 | 0.883333333333333 | 53 | 28 | 78.3 | 1 | 177 | 37 | 49 | 101 | MFB6177911.1 AAA family ATPase [Halobaculum sp.] | diamond | 159 | 40 | 1 | Archaea | Stenosarchaea group | Methanobacteriati | Methanobacteriota | Halobacteria | Halobacteriales | Haloferacaceae | Halobaculum | Halobaculum sp. | |
| 32892524 | 32892524 | PRJNA605033_P_NODE_228780_length_155_cov_4.200000_g227211_i0 | PRJNA605033 | 228780 | 155 | 4.2 | 6.51 | Nitrosopumilus ureiphilus | 1470067 | Archaea | Archaea | 44.3 | 0.00321 | NR | WP_179372584.1 | 1470067 | g227211 | i0 | 53.6 | 2.12903225806452 | 28 | 13 | 54.2 | 0 | 1 | 84 | 439 | 466 | WP_179372584.1 serpin family protein [Nitrosopumilus ureiphilus] | diamond | 330 | 44.3 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilaceae | Nitrosopumilus | Nitrosopumilus ureiphilus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;