contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA605033" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27080083 | 27080083 | PRJNA605033_P_NODE_73402_length_222_cov_2.850267_g71833_i0 | PRJNA605033 | 73402 | 222 | 2.850267 | 6.32759274 | Mycoplasma sp. CAG:956 | 1262908 | Bacteria | Bacteria | 79.7 | 2.01e-15 | NR | CCY89171.1 | 1262908 | g71833 | i0 | 50 | 1.27027027027027 | 94 | 26 | 98.6 | 1 | 3 | 221 | 121 | 214 | CCY89171.1 transglutaminase-like superfamily [Mycoplasma sp. CAG:956] | diamond | 282 | 79.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. CAG:956 | ||
| 27617293 | 27617293 | PRJNA605033_P_NODE_230944_length_155_cov_1.333333_g229375_i0 | PRJNA605033 | 230944 | 155 | 1.333333 | 2.06666615 | Mycoplasma sp. CAG:956 | 1262908 | Bacteria | Bacteria | 113 | 9.35e-29 | NR | CCY87999.1 | 1262908 | g229375 | i0 | 100 | 1.9741935483871 | 51 | 0 | 98.7 | 0 | 2 | 154 | 165 | 215 | CCY87999.1 unknown [Mycoplasma sp. CAG:956] | diamond | 306 | 113 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. CAG:956 | ||
| 28532947 | 28532947 | PRJNA605033_P_NODE_105847_length_222_cov_1.855615_g104278_i0 | PRJNA605033 | 105847 | 222 | 1.855615 | 4.1194653 | Mycoplasma sp. CAG:956 | 1262908 | Bacteria | Bacteria | 83.6 | 2.04e-18 | NR | CCY89330.1 | 1262908 | g104278 | i0 | 63.5 | 1 | 74 | 2 | 100 | 1 | 222 | 1 | 72 | 120 | CCY89330.1 putative uncharacterized protein [Mycoplasma sp. CAG:956] | diamond | 222 | 83.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. CAG:956 | ||
| 28879971 | 28879971 | PRJNA605033_P_NODE_116088_length_222_cov_1.684492_g114519_i0 | PRJNA605033 | 116088 | 222 | 1.684492 | 3.73957224 | Mycoplasma sp. CAG:956 | 1262908 | Bacteria | Bacteria | 70.5 | 4.65e-12 | NR | CCY87894.1 | 1262908 | g114519 | i0 | 42.3 | 1.5 | 111 | 26 | 98.6 | 1 | 221 | 3 | 200 | 310 | CCY87894.1 unknown [Mycoplasma sp. CAG:956] | diamond | 333 | 70.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. CAG:956 | ||
| 30364830 | 30364830 | PRJNA605033_P_NODE_207392_length_163_cov_1.398438_g205823_i0 | PRJNA605033 | 207392 | 163 | 1.398438 | 2.27945394 | Mycoplasma sp. CAG:956 | 1262908 | Bacteria | Bacteria | 107 | 6.56e-27 | NR | CCY89278.1 | 1262908 | g205823 | i0 | 98.1 | 0.975460122699387 | 53 | 1 | 97.5 | 0 | 161 | 3 | 108 | 160 | CCY89278.1 uncharacterized protein BN817_01182 [Mycoplasma sp. CAG:956] | diamond | 159 | 107 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. CAG:956 | ||
| 30869937 | 30869937 | PRJNA605033_P_NODE_89194_length_222_cov_2.208556_g87625_i0 | PRJNA605033 | 89194 | 222 | 2.208556 | 4.90299432 | Candidatus Phytoplasma australasiaticum | 2754999 | Bacteria | Bacteria | 60.5 | 9.72e-10 | NR | MDV3191835.1 | 2754999 | g87625 | i0 | 49.3 | 0.986486486486487 | 73 | 24 | 98.6 | 1 | 221 | 3 | 2 | 61 | MDV3191835.1 hypothetical protein [Candidatus Phytoplasma australasiaticum] | diamond | 219 | 60.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma australasiaticum | ||
| 31185643 | 31185643 | PRJNA605033_P_NODE_246555_length_150_cov_3.513043_g244986_i0 | PRJNA605033 | 246555 | 150 | 3.513043 | 5.2695645 | Candidatus Phytoplasma australasiaticum | 2754999 | Bacteria | Bacteria | 77 | 3.76e-17 | NR | MDV3180606.1 | 2754999 | g244986 | i0 | 81.6 | 0.98 | 49 | 9 | 98 | 0 | 150 | 4 | 15 | 63 | MDV3180606.1 hypothetical protein [Candidatus Phytoplasma australasiaticum] | diamond | 147 | 77 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma australasiaticum | ||
| 31280720 | 31280720 | PRJNA605033_P_NODE_33215_length_268_cov_2.360515_g31649_i0 | PRJNA605033 | 33215 | 268 | 2.360515 | 6.3261802 | Mycoplasmoides pneumoniae | 2104 | Bacteria | Bacteria | 92 | 2.86e-22 | NR | WP_200848130.1 | 2104 | g31649 | i0 | 97.9 | 0.537313432835821 | 48 | 1 | 53.7 | 0 | 268 | 125 | 21 | 68 | WP_200848130.1 hypothetical protein, partial [Mycoplasmoides pneumoniae] | diamond | 144 | 92 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Mycoplasmoides | Mycoplasmoides pneumoniae | |||
| 31768351 | 31768351 | PRJNA605033_P_NODE_83477_length_222_cov_2.379679_g81908_i0 | PRJNA605033 | 83477 | 222 | 2.379679 | 5.28288738 | Bacillati | 1783272 | Bacteria | Bacteria | 50.1 | 5.18e-5 | NR | MDD7395364.1 | 2053494 | g81908 | i0 | 100 | 0.648648648648649 | 24 | 0 | 32.4 | 0 | 73 | 2 | 147 | 170 | MDD7395364.1 hypothetical protein [Acholeplasmatales bacterium] | diamond | 144 | 50.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmatales bacterium | ||||
| 32735413 | 32735413 | PRJNA605033_P_NODE_86180_length_222_cov_2.288770_g84611_i0 | PRJNA605033 | 86180 | 222 | 2.28877 | 5.0810694 | Candidatus Phytoplasma australasiaticum | 2754999 | Bacteria | Bacteria | 43.5 | 0.00355 | NR | MDV3180609.1 | 2754999 | g84611 | i0 | 78.3 | 0.310810810810811 | 23 | 5 | 31.1 | 0 | 71 | 3 | 14 | 36 | MDV3180609.1 hypothetical protein [Candidatus Phytoplasma australasiaticum] | diamond | 69 | 43.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma australasiaticum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;