RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA605033" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27838001 27838001 PRJNA605033_P_NODE_213144_length_161_cov_1.246032_g211575_i0 PRJNA605033 213144 161 1.246032 2.00611152 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 49.7 4.32e-5   NR MBI3625456.1 2053607 g211575 i0 50 1.86335403726708 50 25 93.2 0 2 151 64 113 MBI3625456.1 tetratricopeptide repeat protein [Candidatus Rokuibacteriota bacterium] diamond 300 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30964901 30964901 PRJNA605033_P_NODE_55134_length_232_cov_2.928934_g53566_i0 PRJNA605033 55134 232 2.928934 6.79512688 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 55.5 9.74e-7   NR PYN42090.1 2053607 g53566 i0 82.1 1.44827586206897 28 5 36.2 0 232 149 20 47 PYN42090.1 MAG: IS5 family transposase [Candidatus Rokuibacteriota bacterium] diamond 336 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;