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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA605033" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA605033 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10073213 10073213 PRJNA605033_P_NODE_11388_length_412_cov_2.628647_g9857_i0 PRJNA605033 11388 412 2.628647 10.83002564 Thermococcus 2263 Archaea Archaea 256 1.69e-78   NR MEO2152736.1 35749 g9857 i0 98.5 17.8252427184466 136 2 99 0 3 410 511 646 MEO2152736.1 DNA polymerase domain-containing protein [Thermococcus sp.] diamond 7344 256 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.
19708237 19708237 PRJNA605033_P_NODE_1576_length_1291_cov_2.747611_g758_i0 PRJNA605033 1576 1291 2.747611 35.47165801 Thermococcus 2263 Archaea Archaea 807 1.87e-276   NR WP_014121997.1 246969 g758 i0 88 2.16576297443842 466 20 99.9 3 2 1291 1 466 WP_014121997.1 DNA polymerase domain-containing protein [Thermococcus sp. AM4] diamond 2796 807 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. AM4
24809335 24809335 PRJNA605033_P_NODE_64140_length_222_cov_4.679144_g62571_i0 PRJNA605033 64140 222 4.679144 10.38769968 Halovenus aranensis 890420 Archaea Archaea 67.8 3.8e-11   NR SDJ86709.1 890420 g62571 i0 46.6 0.986486486486487 73 30 98.6 1 220 2 271 334 SDJ86709.1 Transposase DDE domain-containing protein [Halovenus aranensis] diamond 219 67.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus aranensis
26935006 26935006 PRJNA605033_P_NODE_153282_length_191_cov_3.147436_g151713_i0 PRJNA605033 153282 191 3.147436 6.01160276 Thermococcus 2263 Archaea Archaea 133 2.07e-34   NR WP_167728776.1 163002 g151713 i0 100 4.94764397905759 63 0 99 0 2 190 1761 1823 WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] diamond 945 133 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9N3
28596069 28596069 PRJNA605033_P_NODE_109247_length_222_cov_1.807487_g107678_i0 PRJNA605033 109247 222 1.807487 4.01262114 Methanospirillum sp. 45200 Archaea Archaea 50.1 7.37e-5   NR MBP9009538.1 45200 g107678 i0 41.1 1.97297297297297 73 20 98.6 1 219 1 199 248 MBP9009538.1 DNA cytosine methyltransferase [Methanospirillum sp.] diamond 438 50.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum sp.
30585416 30585416 PRJNA605033_P_NODE_180613_length_174_cov_6.985612_g179044_i0 PRJNA605033 180613 174 6.985612 12.15496488 Pyrococcus furiosus 2261 Archaea Archaea 110 1.47e-26   NR 4AHC_A 2261 g179044 i0 96.5 0.982758620689655 57 2 98.3 0 172 2 131 187 4AHC_A Chain A, DNA POLYMERASE [Pyrococcus furiosus] diamond 171 110 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
32229986 32229986 PRJNA605033_P_NODE_170558_length_180_cov_1.379310_g168989_i0 PRJNA605033 170558 180 1.37931 2.482758 Halobaculum sp. 1891221 Archaea Archaea 40 0.0495   NR MFB6177911.1 1891221 g168989 i0 35.8 0.883333333333333 53 28 78.3 1 177 37 49 101 MFB6177911.1 AAA family ATPase [Halobaculum sp.] diamond 159 40 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;