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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA603943" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA603943 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26604932 26604932 PRJNA603943_P_NODE_57241_length_249_cov_0.875000_g57049_i0 PRJNA603943 57241 249 0.875 2.17875 Lentisphaeria bacterium 2053569 Bacteria Bacteria 159 4.56e-44   NR HCG26448.1 2053569 g57049 i0 100 0.987951807228916 82 0 98.8 0 248 3 388 469 HCG26448.1 replicative DNA helicase [Lentisphaeria bacterium] diamond 246 159 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
26795181 26795181 PRJNA603943_P_NODE_40981_length_288_cov_1.423256_g40789_i0 PRJNA603943 40981 288 1.423256 4.09897728 Lentisphaerota bacterium 1932692 Bacteria Bacteria 55.5 2.03e-6   NR MCP3965836.1 1932692 g40789 i0 42 1.45833333333333 69 40 71.9 0 27 233 284 352 MCP3965836.1 winged helix-turn-helix domain-containing protein [Lentisphaerota bacterium] diamond 420 55.5 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
26890378 26890378 PRJNA603943_P_NODE_56541_length_249_cov_0.875000_g56349_i0 PRJNA603943 56541 249 0.875 2.17875 Victivallis vadensis 172901 Bacteria Bacteria 170 7.41e-47   NR WP_276742633.1 172901 g56349 i0 98.8 1 83 1 100 0 1 249 559 641 WP_276742633.1 sugar-binding protein [Victivallis vadensis] diamond 249 170 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
27174600 27174600 PRJNA603943_P_NODE_64582_length_244_cov_0.900585_g64390_i0 PRJNA603943 64582 244 0.900585 2.1974274 Lentisphaerota bacterium 1932692 Bacteria Bacteria 149 6.799999999999998e-44   NR PWM80222.1 1932692 g64390 i0 98.7 0.971311475409836 79 1 97.1 0 238 2 1 79 PWM80222.1 MAG: YaiI/YqxD family protein [Lentisphaerota bacterium] diamond 237 149 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
27174602 27174602 PRJNA603943_P_NODE_66862_length_243_cov_0.905882_g66670_i0 PRJNA603943 66862 243 0.905882 2.20129326 Lentisphaeria bacterium 2053569 Bacteria Bacteria 150 1.0600000000000001e-44   NR MBP3393810.1 2053569 g66670 i0 87.5 1.97530864197531 80 10 98.8 0 2 241 28 107 MBP3393810.1 DUF1559 domain-containing protein [Lentisphaeria bacterium] diamond 480 150 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27206145 27206145 PRJNA603943_P_NODE_67302_length_243_cov_0.905882_g67110_i0 PRJNA603943 67302 243 0.905882 2.20129326 Victivallis vadensis 172901 Bacteria Bacteria 89.7 1.87e-19   NR WP_116882683.1 172901 g67110 i0 100 0.592592592592593 48 0 59.3 0 100 243 1 48 WP_116882683.1 hypothetical protein [Victivallis vadensis] diamond 144 89.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
27219414 27219414 PRJNA603943_P_NODE_68222_length_242_cov_0.911243_g68030_i0 PRJNA603943 68222 242 0.911243 2.20520806 Victivallis 172900 Bacteria Bacteria 172 8.36e-49   NR WP_302812389.1 172901 g68030 i0 96.3 2.97520661157025 80 3 99.2 0 240 1 176 255 WP_302812389.1 exodeoxyribonuclease V subunit gamma, partial [Victivallis vadensis] diamond 720 172 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
27251259 27251259 PRJNA603943_P_NODE_46083_length_272_cov_1.296482_g45891_i0 PRJNA603943 46083 272 1.296482 3.52643104 Bacteria 2 Bacteria Bacteria 177 2.1599999999999995e-54   NR MBP3395169.1 2053569 g45891 i0 100 2.74632352941176 83 0 91.5 0 270 22 109 191 MBP3395169.1 hypothetical protein [Lentisphaeria bacterium] diamond 747 177 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28059038 28059038 PRJNA603943_P_NODE_57685_length_248_cov_0.880000_g57493_i0 PRJNA603943 57685 248 0.88 2.1824 Lentisphaeria bacterium 2053569 Bacteria Bacteria 170 5.21e-47   NR HCG24976.1 2053569 g57493 i0 100 0.991935483870968 82 0 99.2 0 3 248 905 986 HCG24976.1 hypothetical protein [Lentisphaeria bacterium] diamond 246 170 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28122244 28122244 PRJNA603943_P_NODE_55565_length_250_cov_0.870056_g55373_i0 PRJNA603943 55565 250 0.870056 2.17514 Lentisphaeria bacterium 2053569 Bacteria Bacteria 184 2.3099999999999993e-52   NR HCG24131.1 2053569 g55373 i0 100 0.984 82 0 98.4 0 3 248 666 747 HCG24131.1 hypothetical protein [Lentisphaeria bacterium] diamond 246 184 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28216724 28216724 PRJNA603943_P_NODE_70426_length_241_cov_0.916667_g70234_i0 PRJNA603943 70426 241 0.916667 2.20916747 Victivallis vadensis 172901 Bacteria Bacteria 169 4.2800000000000004e-49   NR WP_168962765.1 172901 g70234 i0 98.7 0.983402489626556 79 1 98.3 0 239 3 182 260 WP_168962765.1 DNA glycosylase AlkZ-like family protein [Victivallis vadensis] diamond 237 169 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
28911279 28911279 PRJNA603943_P_NODE_57188_length_249_cov_0.875000_g56996_i0 PRJNA603943 57188 249 0.875 2.17875 Victivallis vadensis 172901 Bacteria Bacteria 158 2.77e-44   NR WP_168962316.1 172901 g56996 i0 100 0.975903614457831 81 0 97.6 0 245 3 1 81 WP_168962316.1 hypothetical protein [Victivallis vadensis] diamond 243 158 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
29195909 29195909 PRJNA603943_P_NODE_69749_length_241_cov_0.916667_g69557_i0 PRJNA603943 69749 241 0.916667 2.20916747 Victivallis vadensis 172901 Bacteria Bacteria 165 4.84e-48   NR WP_133245227.1 172901 g69557 i0 100 0.983402489626556 79 0 98.3 0 239 3 129 207 WP_133245227.1 GntR family transcriptional regulator [Victivallis vadensis] diamond 237 165 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
29258654 29258654 PRJNA603943_P_NODE_62029_length_246_cov_0.890173_g61837_i0 PRJNA603943 62029 246 0.890173 2.18982558 Victivallales bacterium 2212475 Bacteria Bacteria 114 4.89e-28   NR MEI3003343.1 2212475 g61837 i0 100 0.646341463414634 53 0 64.6 0 245 87 324 376 MEI3003343.1 Gfo/Idh/MocA family oxidoreductase [Victivallales bacterium] diamond 159 114 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
29385313 29385313 PRJNA603943_P_NODE_24289_length_356_cov_1.088339_g24097_i0 PRJNA603943 24289 356 1.088339 3.87448684 Victivallis vadensis 172901 Bacteria Bacteria 242 5.69e-73   NR WP_116882658.1 172901 g24097 i0 100 0.99438202247191 118 0 99.4 0 356 3 595 712 WP_116882658.1 hypothetical protein [Victivallis vadensis] diamond 354 242 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
29448125 29448125 PRJNA603943_P_NODE_66090_length_243_cov_0.905882_g65898_i0 PRJNA603943 66090 243 0.905882 2.20129326 uncultured Victivallis sp. 354118 Bacteria Bacteria 167 7.68e-46   NR WP_288593585.1 354118 g65898 i0 100 1 81 0 100 0 1 243 774 854 WP_288593585.1 LamG-like jellyroll fold domain-containing protein [uncultured Victivallis sp.] diamond 243 167 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis uncultured Victivallis sp.
29542981 29542981 PRJNA603943_P_NODE_35070_length_309_cov_1.305085_g34878_i0 PRJNA603943 35070 309 1.305085 4.03271265 Lentisphaeria bacterium 2053569 Bacteria Bacteria 204 9.41e-59   NR HCG28043.1 2053569 g34878 i0 100 0.990291262135922 102 0 99 0 307 2 690 791 HCG28043.1 hypothetical protein [Lentisphaeria bacterium] diamond 306 204 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
30048196 30048196 PRJNA603943_P_NODE_58871_length_248_cov_0.880000_g58679_i0 PRJNA603943 58871 248 0.88 2.1824 Victivallis vadensis 172901 Bacteria Bacteria 153 6.93e-45   NR WP_116883895.1 172901 g58679 i0 100 0.991935483870968 82 0 99.2 0 247 2 5 86 WP_116883895.1 LolA family protein [Victivallis vadensis] diamond 246 153 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
30237974 30237974 PRJNA603943_P_NODE_56552_length_249_cov_0.875000_g56360_i0 PRJNA603943 56552 249 0.875 2.17875 Lentisphaeria bacterium 2053569 Bacteria Bacteria 46.2 5.88e-4   NR MBQ4106216.1 2053569 g56360 i0 73.3 0.36144578313253 30 8 36.1 0 92 3 1 30 MBQ4106216.1 hypothetical protein [Lentisphaeria bacterium] diamond 90 46.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
30409534 30409534 PRJNA603943_P_NODE_45573_length_274_cov_1.149254_g45381_i0 PRJNA603943 45573 274 1.149254 3.14895596 Victivallis 172900 Bacteria Bacteria 188 1.3e-56   NR WP_276741063.1 172901 g45381 i0 97.8 1.99270072992701 91 2 99.6 0 1 273 204 294 WP_276741063.1 GntR family transcriptional regulator [Victivallis vadensis] diamond 546 188 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
30490774 30490774 PRJNA603943_P_NODE_50093_length_259_cov_1.241935_g49901_i0 PRJNA603943 50093 259 1.241935 3.21661165 Victivallis vadensis 172901 Bacteria Bacteria 165 5.67e-48   NR WP_168962944.1 172901 g49901 i0 97.6 0.984555984555985 85 2 98.5 0 3 257 244 328 WP_168962944.1 substrate-binding domain-containing protein [Victivallis vadensis] diamond 255 165 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
30661924 30661924 PRJNA603943_P_NODE_56033_length_249_cov_0.875000_g55841_i0 PRJNA603943 56033 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 167 1.5599999999999994e-48   NR HCG26162.1 2053569 g55841 i0 100 1.97590361445783 82 0 98.8 0 2 247 52 133 HCG26162.1 gfo/Idh/MocA family oxidoreductase [Lentisphaeria bacterium] diamond 492 167 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
30680066 30680066 PRJNA603943_P_NODE_49493_length_261_cov_1.228723_g49301_i0 PRJNA603943 49493 261 1.228723 3.20696703 Victivallis vadensis 172901 Bacteria Bacteria 177 3.13e-49   NR HJH05131.1 172901 g49301 i0 94.2 2.96551724137931 86 5 98.9 0 260 3 529 614 HJH05131.1 DUF4838 domain-containing protein [Victivallis vadensis] diamond 774 177 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
30775250 30775250 PRJNA603943_P_NODE_69494_length_241_cov_0.916667_g69302_i0 PRJNA603943 69494 241 0.916667 2.20916747 Victivallales bacterium 2212475 Bacteria Bacteria 72 3.55e-14   NR MEI3005939.1 2212475 g69302 i0 72.1 0.535269709543568 43 12 53.5 0 239 111 47 89 MEI3005939.1 hypothetical protein [Victivallales bacterium] diamond 129 72 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
30914859 30914859 PRJNA603943_P_NODE_66294_length_243_cov_0.905882_g66102_i0 PRJNA603943 66294 243 0.905882 2.20129326 Victivallis 172900 Bacteria Bacteria 91.7 3.54e-20   NR WP_276739548.1 172901 g66102 i0 68.9 1.82716049382716 74 20 91.4 1 224 3 168 238 WP_276739548.1 AraC family transcriptional regulator [Victivallis vadensis] diamond 444 91.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
31122241 31122241 PRJNA603943_P_NODE_52875_length_251_cov_0.865169_g52683_i0 PRJNA603943 52875 251 0.865169 2.17157419 Victivallis vadensis 172901 Bacteria Bacteria 171 1.19e-51   NR WP_302811550.1 172901 g52683 i0 100 1.9840637450199201 83 0 99.2 0 1 249 53 135 WP_302811550.1 hypothetical protein [Victivallis vadensis] diamond 498 171 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
31597207 31597207 PRJNA603943_P_NODE_65336_length_244_cov_0.900585_g65144_i0 PRJNA603943 65336 244 0.900585 2.1974274 Victivallis vadensis 172901 Bacteria Bacteria 93.2 1.45e-20   NR WP_168963380.1 172901 g65144 i0 98 0.602459016393443 49 1 60.2 0 1 147 265 313 WP_168963380.1 DMT family transporter [Victivallis vadensis] diamond 147 93.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
31597210 31597210 PRJNA603943_P_NODE_69656_length_241_cov_0.916667_g69464_i0 PRJNA603943 69656 241 0.916667 2.20916747 Lentisphaeria bacterium 2053569 Bacteria Bacteria 170 1.5799999999999998e-47   NR HCG49442.1 2053569 g69464 i0 100 0.983402489626556 79 0 98.3 0 239 3 329 407 HCG49442.1 hypothetical protein [Lentisphaeria bacterium] diamond 237 170 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31628571 31628571 PRJNA603943_P_NODE_54756_length_250_cov_0.870056_g54564_i0 PRJNA603943 54756 250 0.870056 2.17514 uncultured Victivallis sp. 354118 Bacteria Bacteria 88.6 2.76e-18   NR WP_288559123.1 354118 g54564 i0 100 0.528 44 0 52.8 0 250 119 456 499 WP_288559123.1 hypothetical protein [uncultured Victivallis sp.] diamond 132 88.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis uncultured Victivallis sp.
31628577 31628577 PRJNA603943_P_NODE_62836_length_245_cov_0.895349_g62644_i0 PRJNA603943 62836 245 0.895349 2.19360505 Lentisphaeria bacterium 2053569 Bacteria Bacteria 159 2.99e-43   NR HCG25937.1 2053569 g62644 i0 93.8 0.991836734693878 81 5 99.2 0 245 3 66 146 HCG25937.1 hypothetical protein [Lentisphaeria bacterium] diamond 243 159 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31723429 31723429 PRJNA603943_P_NODE_63077_length_245_cov_0.895349_g62885_i0 PRJNA603943 63077 245 0.895349 2.19360505 Lentisphaeria bacterium 2053569 Bacteria Bacteria 157 1.1e-45   NR MBP3393143.1 2053569 g62885 i0 98.8 0.991836734693878 81 1 99.2 0 244 2 21 101 MBP3393143.1 PHP domain-containing protein [Lentisphaeria bacterium] diamond 243 157 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32008245 32008245 PRJNA603943_P_NODE_44618_length_277_cov_1.132353_g44426_i0 PRJNA603943 44618 277 1.132353 3.13661781 Victivallis vadensis 172901 Bacteria Bacteria 196 1.2799999999999998e-56   NR WP_302452650.1 172901 g44426 i0 100 0.985559566787004 91 0 98.6 0 3 275 469 559 WP_302452650.1 TIM-barrel domain-containing protein [Victivallis vadensis] diamond 273 196 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
32261637 32261637 PRJNA603943_P_NODE_23118_length_363_cov_1.062069_g22926_i0 PRJNA603943 23118 363 1.062069 3.85531047 Victivallis vadensis 172901 Bacteria Bacteria 256 6.5e-78   NR WP_168963316.1 172901 g22926 i0 100 1 121 0 100 0 1 363 655 775 WP_168963316.1 beta-galactosidase [Victivallis vadensis] diamond 363 256 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae Victivallis Victivallis vadensis
32274811 32274811 PRJNA603943_P_NODE_2698_length_873_cov_1.238750_g2545_i0 PRJNA603943 2698 873 1.23875 10.8142875 Pseudomonadati 3379134 Bacteria Bacteria 140 1.39e-33   NR WP_007279866.1 256847 g2545 i0 29.1 4.03780068728522 292 182 99.3 8 870 4 298 567 WP_007279866.1 BRCT domain-containing protein [Lentisphaera araneosa] diamond 3525 140 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Lentisphaera Lentisphaera araneosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;