RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA603943" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA603943 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27142835 27142835 PRJNA603943_P_NODE_62542_length_245_cov_1.401163_g62350_i0 PRJNA603943 62542 245 1.401163 3.43284935 Bodo saltans 75058 Euglenozoa other_Eukaryota 60.8 1.55e-8   NR CUG26015.1 75058 g62350 i0 45.6 1.8 68 37 83.3 0 34 237 7 74 CUG26015.1 copine i-like protein, putative [Bodo saltans] diamond 441 60.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27206146 27206146 PRJNA603943_P_NODE_68442_length_242_cov_0.911243_g68250_i0 PRJNA603943 68442 242 0.911243 2.20520806 Bodo saltans 75058 Euglenozoa other_Eukaryota 83.6 1.32e-18   NR CUG92907.1 75058 g68250 i0 54 0.78099173553719 63 29 78.1 0 231 43 53 115 CUG92907.1 membrane-associated protein, putative [Bodo saltans] diamond 189 83.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27712207 27712207 PRJNA603943_P_NODE_41404_length_287_cov_1.079439_g41212_i0 PRJNA603943 41404 287 1.079439 3.09798993 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 124 3.0899999999999993e-31   NR KAJ9467001.1 91374 g41212 i0 55.8 2.0383275261324 95 42 99.3 0 287 3 55 149 KAJ9467001.1 Pectin acetylesterase 9 [Diplonema papillatum] diamond 585 124 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32672023 32672023 PRJNA603943_P_NODE_24080_length_357_cov_1.373239_g23888_i0 PRJNA603943 24080 357 1.373239 4.90246323 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 62 1.03e-8   NR XP_015651506.1 157538 g23888 i0 32.7 0.899159663865546 107 70 88.2 2 328 14 37 143 XP_015651506.1 hypothetical protein ABB37_10147 [Leptomonas pyrrhocoris] diamond 321 62 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;