RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA603943" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA603943 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6246700 6246700 PRJNA603943_P_NODE_18345_length_396_cov_1.430341_g18153_i0 PRJNA603943 18345 396 1.430341 5.66415036 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 81.3 6.95e-17   NR RLG19529.1 2250274 g18153 i0 55.4 0.492424242424242 65 25 49.2 1 176 370 6 66 RLG19529.1 MAG: hypothetical protein DRN74_06725 [Candidatus Micrarchaeota archaeon] diamond 195 81.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
29101094 29101094 PRJNA603943_P_NODE_11168_length_483_cov_1.092683_g10977_i0 PRJNA603943 11168 483 1.092683 5.27765889 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 101 1.2399999999999999e-23   NR MFA5174651.1 2026773 g10977 i0 34.1 1.90062111801242 164 65 83.2 4 2 403 38 188 MFA5174651.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 918 101 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30237978 30237978 PRJNA603943_P_NODE_59752_length_247_cov_0.885057_g59560_i0 PRJNA603943 59752 247 0.885057 2.18609079 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 102 3.1999999999999998e-24   NR MFA5050477.1 3018267 g59560 i0 53.5 2.00404858299595 86 36 99.6 1 246 1 185 270 MFA5050477.1 ornithine carbamoyltransferase [Candidatus Micrarchaeia archaeon] diamond 495 102 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;