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contig_metadata

20 rows where analysis = "diamond", bioproject = "PRJNA602115" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA602115 · 20 ✖

analysis 1

  • diamond · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
575734 575734 PRJNA602115_P_NODE_5981_length_260_cov_1.286432_g5956_i0 PRJNA602115 5981 260 1.286432 3.3447232 Ursus arctos 9644 Chordata Chordata 73.6 6.63e-13   NR XP_057170311.1 9644 g5956 i0 50.6 4.03846153846154 87 36 99.2 2 260 3 1034 1114 XP_057170311.1 granule associated Rac and RHOG effector protein 1 isoform X1 [Ursus arctos] diamond 1050 73.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ursus Ursus arctos
3694374 3694374 PRJNA602115_P_NODE_10763_length_204_cov_0.895105_g10738_i0 PRJNA602115 10763 204 0.895105 1.8260142 Oryctolagus cuniculus 9986 Chordata Chordata 94.7 1.05e-20   NR XP_069931346.1 9986 g10738 i0 69.6 3.29411764705882 56 17 82.4 0 36 203 421 476 XP_069931346.1 peroxisome biogenesis factor 2 isoform X1 [Oryctolagus cuniculus] diamond 672 94.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
12055099 12055099 PRJNA602115_P_NODE_9010_length_209_cov_0.864865_g8985_i0 PRJNA602115 9010 209 0.864865 1.80756785 Mammalia 40674 Chordata Chordata 102 1.7099999999999998e-23   NR BAA25253.1 9615 g8985 i0 61.8 47.7846889952153 68 26 97.6 0 3 206 1009 1076 BAA25253.1 unnamed protein product [Canis lupus familiaris] diamond 9987 102 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Canis Canis lupus
26921771 26921771 PRJNA602115_P_NODE_5742_length_265_cov_1.254902_g5717_i0 PRJNA602115 5742 265 1.254902 3.3254903 Branchiostoma floridae 7739 Chordata Chordata 53.9 7.43e-7   NR XP_035672348.1 7739 g5717 i0 37 0.916981132075472 81 47 87.2 1 245 15 28 108 XP_035672348.1 parvalbumin alpha-like [Branchiostoma floridae] diamond 243 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
26984947 26984947 PRJNA602115_P_NODE_7842_length_225_cov_1.079268_g7817_i0 PRJNA602115 7842 225 1.079268 2.428353 Leptonychotes weddellii 9713 Chordata Chordata 45.4 0.00316   NR XP_030889778.1 9713 g7817 i0 53.8 0.693333333333333 52 20 65.3 3 161 15 41 91 XP_030889778.1 collagen alpha-1(XVIII) chain-like [Leptonychotes weddellii] diamond 156 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Phocidae Leptonychotes Leptonychotes weddellii
26984948 26984948 PRJNA602115_P_NODE_9642_length_207_cov_0.876712_g9617_i0 PRJNA602115 9642 207 0.876712 1.81479384 Oryctolagus cuniculus 9986 Chordata Chordata 43.1 0.0165   NR XP_051684610.1 9986 g9617 i0 85 0.289855072463768 20 3 29 0 87 146 343 362 XP_051684610.1 CDK5 and ABL1 enzyme substrate 2 isoform X4 [Oryctolagus cuniculus] diamond 60 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
27142787 27142787 PRJNA602115_P_NODE_9522_length_207_cov_0.876712_g9497_i0 PRJNA602115 9522 207 0.876712 1.81479384 Lepus europaeus 9983 Chordata Chordata 44.3 0.0056   NR XP_062066945.1 9983 g9497 i0 47.9 0.695652173913043 48 22 65.2 1 60 194 119 166 XP_062066945.1 uncharacterized protein LOC133773571 isoform X2 [Lepus europaeus] diamond 144 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Lepus Lepus europaeus
27237922 27237922 PRJNA602115_P_NODE_8783_length_209_cov_0.864865_g8758_i0 PRJNA602115 8783 209 0.864865 1.80756785 Branchiostoma belcheri 7741 Chordata Chordata 53.9 2.66e-6   NR XP_019622429.1 7741 g8758 i0 50 1.76555023923445 60 29 84.7 1 194 18 170 229 XP_019622429.1 PREDICTED: protein ABHD15-like isoform X2 [Branchiostoma belcheri] diamond 369 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
27617164 27617164 PRJNA602115_P_NODE_5384_length_274_cov_1.061033_g5359_i0 PRJNA602115 5384 274 1.061033 2.90723042 Lepus europaeus 9983 Chordata Chordata 72.4 2.1e-12   NR XP_062067949.1 9983 g5359 i0 53.9 0.974452554744526 89 38 97.4 1 274 8 1712 1797 XP_062067949.1 cardiomyopathy-associated protein 5 [Lepus europaeus] diamond 267 72.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Lepus Lepus europaeus
27743607 27743607 PRJNA602115_P_NODE_3904_length_312_cov_1.079681_g3879_i0 PRJNA602115 3904 312 1.079681 3.36860472 Ochotona princeps 9978 Chordata Chordata 46.2 0.00501   NR XP_058534274.1 9978 g3879 i0 75 0.230769230769231 24 6 23.1 0 53 124 37 60 XP_058534274.1 cyclin-D-binding Myb-like transcription factor 1 isoform X1 [Ochotona princeps] diamond 72 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Ochotonidae Ochotona Ochotona princeps
28343231 28343231 PRJNA602115_P_NODE_11526_length_202_cov_0.907801_g11501_i0 PRJNA602115 11526 202 0.907801 1.83375802 Polypterus senegalus 55291 Chordata Chordata 56.2 3.89e-7   NR XP_039613228.1 55291 g11501 i0 36.6 3.17821782178218 71 41 99.5 1 202 2 839 909 XP_039613228.1 protein mono-ADP-ribosyltransferase PARP14-like [Polypterus senegalus] diamond 642 56.2 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
29164381 29164381 PRJNA602115_P_NODE_6149_length_257_cov_0.979592_g6124_i0 PRJNA602115 6149 257 0.979592 2.51755144 Oryctolagus cuniculus 9986 Chordata Chordata 43.9 0.0178   NR XP_069924009.1 9986 g6124 i0 49 0.595330739299611 51 22 56 2 5 148 1456 1505 XP_069924009.1 xanthine dehydrogenase/oxidase isoform X1 [Oryctolagus cuniculus] diamond 153 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
29542961 29542961 PRJNA602115_P_NODE_10850_length_203_cov_1.683099_g10825_i0 PRJNA602115 10850 203 1.683099 3.41669097 Nyctereutes procyonoides 34880 Chordata Chordata 72.4 7.62e-13   NR CAD7670123.1 34880 g10825 i0 74.1 0.857142857142857 58 14 85.7 1 201 28 131 187 CAD7670123.1 unnamed protein product [Nyctereutes procyonoides] diamond 174 72.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
29840507 29840507 PRJNA602115_P_NODE_10891_length_203_cov_0.915493_g10866_i0 PRJNA602115 10891 203 0.915493 1.85845079 Mammalia 40674 Chordata Chordata 49.3 1.03e-4   NR XDA72768.1 9940 g10866 i0 100 3 23 0 34 0 72 4 50 72 XDA72768.1 hypothetical protein R6Z07_003092 [Ovis aries] diamond 609 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
29858728 29858728 PRJNA602115_P_NODE_511_length_813_cov_1.377660_g489_i0 PRJNA602115 511 813 1.37766 11.2003758 Lepus europaeus 9983 Chordata Chordata 187 5.97e-50   NR XP_062059407.1 9983 g489 i0 55.3 0.874538745387454 237 90 83.4 5 787 110 291 522 XP_062059407.1 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like [Lepus europaeus] diamond 711 187 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Lepus Lepus europaeus
30883050 30883050 PRJNA602115_P_NODE_3494_length_327_cov_1.146617_g3469_i0 PRJNA602115 3494 327 1.146617 3.74943759 Lagomorpha 9975 Chordata Chordata 58.9 2.03e-7   NR XP_058524823.1 9978 g3469 i0 49.1 1.68807339449541 53 27 48.6 0 153 311 621 673 XP_058524823.1 zinc finger protein 33B-like [Ochotona princeps] diamond 552 58.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Ochotonidae Ochotona Ochotona princeps
31090993 31090993 PRJNA602115_P_NODE_2635_length_372_cov_1.311897_g2610_i0 PRJNA602115 2635 372 1.311897 4.88025684 Oryctolagus cuniculus 9986 Chordata Chordata 80.5 1.04e-14   NR XP_069924615.1 9986 g2610 i0 50 0.806451612903226 100 50 80.6 0 55 354 599 698 XP_069924615.1 EH domain-binding protein 1-like protein 1 isoform X2 [Oryctolagus cuniculus] diamond 300 80.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
31343954 31343954 PRJNA602115_P_NODE_5856_length_263_cov_1.089109_g5831_i0 PRJNA602115 5856 263 1.089109 2.86435667 Cynocephalus volans 110931 Chordata Chordata 46.2 0.00295   NR XP_062932423.1 110931 g5831 i0 50.8 0.695817490494297 61 20 61.6 2 76 237 820 877 XP_062932423.1 nascent polypeptide-associated complex subunit alpha isoform X1 [Cynocephalus volans] diamond 183 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Dermoptera Cynocephalidae Cynocephalus Cynocephalus volans
31705106 31705106 PRJNA602115_P_NODE_11097_length_203_cov_0.901408_g11072_i0 PRJNA602115 11097 203 0.901408 1.82985824 root 1 Root_unresolved Root_unresolved 50.8 3.11e-5   NR XP_069906595.1 9986 g11072 i0 60 2.61576354679803 45 18 66.5 0 201 67 325 369 XP_069906595.1 LOW QUALITY PROTEIN: LINE-1 retrotransposable element ORF2 protein [Oryctolagus cuniculus] diamond 531 51.2 0.9921875 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Leporidae Oryctolagus Oryctolagus cuniculus
32229867 32229867 PRJNA602115_P_NODE_9618_length_207_cov_0.876712_g9593_i0 PRJNA602115 9618 207 0.876712 1.81479384 Ochotona princeps 9978 Chordata Chordata 56.6 7.59e-8   NR XP_058535116.1 9978 g9593 i0 57.9 1.04347826086957 38 16 55.1 0 135 22 116 153 XP_058535116.1 chromatin modification-related protein MEAF6 isoform X1 [Ochotona princeps] diamond 216 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Lagomorpha Ochotonidae Ochotona Ochotona princeps

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;