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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA599026" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA599026 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26826877 26826877 PRJNA599026_S_NODE_70701_length_161_cov_0.910714_g70245_i0 PRJNA599026 70701 161 0.910714 1.46624954 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00353   NR KAF0690009.1 120398 g70245 i0 44 0.93167701863354 50 28 93.2 0 5 154 712 761 KAF0690009.1 hypothetical protein As57867_018509 [Aphanomyces stellatus] diamond 150 44.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
26890279 26890279 PRJNA599026_S_NODE_44981_length_174_cov_1.632000_g44525_i0 PRJNA599026 44981 174 1.632 2.83968 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.12e-5   NR KAG9414054.1 112091 g44525 i0 67.6 0.586206896551724 34 11 58.6 0 1 102 22 55 KAG9414054.1 hypothetical protein AC1031_013260 [Aphanomyces cochlioides] diamond 102 51.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
26998118 26998118 PRJNA599026_S_NODE_44162_length_175_cov_2.642857_g43706_i0 PRJNA599026 44162 175 2.642857 4.62499975 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 79.7 1.4e-15   NR TMW55175.1 41045 g43706 i0 58.6 20.88 58 24 99.4 0 175 2 713 770 TMW55175.1 hypothetical protein Poli38472_013937 [Pythium oligandrum] diamond 3654 80.1 0.995006242197254 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27174450 27174450 PRJNA599026_S_NODE_14422_length_264_cov_2.372093_g13966_i0 PRJNA599026 14422 264 2.372093 6.26232552 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.97e-9   NR CCI40175.1 65357 g13966 i0 42.7 1.70454545454545 75 41 83 1 248 30 129 203 CCI40175.1 unnamed protein product [Albugo candida] diamond 450 62.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
27459249 27459249 PRJNA599026_S_NODE_44183_length_175_cov_2.404762_g43727_i0 PRJNA599026 44183 175 2.404762 4.2083335 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 46.6 4.4e-4   NR RHY32620.1 157072 g43727 i0 55.9 1.16571428571429 34 15 58.3 0 162 61 109 142 RHY32620.1 hypothetical protein DYB32_002384 [Aphanomyces invadans] diamond 204 46.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27837794 27837794 PRJNA599026_S_NODE_2584_length_593_cov_1.886029_g2161_i0 PRJNA599026 2584 593 1.886029 11.18415197 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 66.6 5.27e-9   NR KAH9114937.1 100861 g2161 i0 74.4 0.39460370994941 39 10 19.7 0 241 357 288 326 KAH9114937.1 hypothetical protein AeMF1_011011 [Aphanomyces euteiches] diamond 234 66.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
28324824 28324824 PRJNA599026_S_NODE_41486_length_179_cov_1.961538_g41030_i0 PRJNA599026 41486 179 1.961538 3.51115302 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.18e-5   NR OWZ17142.1 4795 g41030 i0 50 11.7988826815642 46 23 77.1 0 140 3 748 793 OWZ17142.1 hypothetical protein PHMEG_0008957 [Phytophthora megakarya] diamond 2112 52 0.992307692307692 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
28374692 28374692 PRJNA599026_S_NODE_67506_length_162_cov_0.902655_g67050_i0 PRJNA599026 67506 162 0.902655 1.4623011 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 57.8 5.99e-8   NR DBA01409.1 4803 g67050 i0 58.5 5.31481481481481 41 17 75.9 0 2 124 120 160 DBA01409.1 TPA: hypothetical protein N0F65_007306 [Lagenidium giganteum] diamond 861 57.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28501105 28501105 PRJNA599026_S_NODE_16447_length_251_cov_1.321782_g15991_i0 PRJNA599026 16447 251 1.321782 3.31767282 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0112   NR TMW59252.1 41045 g15991 i0 52.6 0.908366533864542 38 18 45.4 0 11 124 155 192 TMW59252.1 hypothetical protein Poli38472_004321 [Pythium oligandrum] diamond 228 44.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28577523 28577523 PRJNA599026_S_NODE_4647_length_442_cov_6.157761_g4192_i0 PRJNA599026 4647 442 6.157761 27.21730362 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 105 3.98e-23   NR DAZ96427.1 4803 g4192 i0 38.7 2.89819004524887 142 85 95 2 22 441 17 158 DAZ96427.1 TPA: hypothetical protein N0F65_006473 [Lagenidium giganteum] diamond 1281 105 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28595935 28595935 PRJNA599026_S_NODE_30047_length_201_cov_2.013158_g29591_i0 PRJNA599026 30047 201 2.013158 4.04644758 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 54.7 1.23e-6   NR TMW65757.1 41045 g29591 i0 52.1 0.716417910447761 48 23 71.6 0 5 148 276 323 TMW65757.1 hypothetical protein Poli38472_008399 [Pythium oligandrum] diamond 144 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28627552 28627552 PRJNA599026_S_NODE_15427_length_257_cov_1.923077_g14971_i0 PRJNA599026 15427 257 1.923077 4.94230789 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 53.1 9.41e-6   NR GLE07933.1 114742 g14971 i0 44.3 0.712062256809339 61 28 71.2 2 256 74 281 335 GLE07933.1 hypothetical protein PINS_up018762 [Pythium insidiosum] diamond 183 53.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28861566 28861566 PRJNA599026_S_NODE_16748_length_249_cov_2.030000_g16292_i0 PRJNA599026 16748 249 2.03 5.0547 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 111 1.35e-28   NR KAF4143879.1 4787 g16292 i0 82.5 7.55421686746988 57 10 68.7 0 66 236 101 157 KAF4143879.1 Ubiquitin-conjugating enzyme, partial [Phytophthora infestans] diamond 1881 112 0.991071428571429 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
29763796 29763796 PRJNA599026_S_NODE_25891_length_212_cov_1.619632_g25435_i0 PRJNA599026 25891 212 1.619632 3.43361984 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 51.2 2.46e-5   NR TMW68956.1 41045 g25435 i0 83.3 1.0188679245283 24 4 34 0 139 210 180 203 TMW68956.1 hypothetical protein Poli38472_001112 [Pythium oligandrum] diamond 216 51.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30061422 30061422 PRJNA599026_S_NODE_131_length_2009_cov_3.832653_g78_i0 PRJNA599026 131 2009 3.832653 76.99799877 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 367 1.2199999999999999e-110   NR KAH9123289.1 100861 g78 i0 42.7 5.53857640617222 452 246 65.6 3 1425 109 403 854 KAH9123289.1 hypothetical protein AeMF1_005676 [Aphanomyces euteiches] diamond 11127 370 0.991891891891892 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30092999 30092999 PRJNA599026_S_NODE_14712_length_262_cov_1.877934_g14256_i0 PRJNA599026 14712 262 1.877934 4.92018708 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.7e-16   NR KAH9090252.1 100861 g14256 i0 47.1 3.9618320610687 87 46 99.6 0 1 261 162 248 KAH9090252.1 hypothetical protein LEN26_018910 [Aphanomyces euteiches] diamond 1038 82.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30111404 30111404 PRJNA599026_S_NODE_25672_length_213_cov_0.932927_g25216_i0 PRJNA599026 25672 213 0.932927 1.98713451 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.79e-6   NR OQR84315.1 1202772 g25216 i0 63.9 0.507042253521127 36 13 50.7 0 105 212 167 202 OQR84315.1 ubiquinone biosynthesis protein COQ9 [Achlya hypogyna] diamond 108 54.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
30283174 30283174 PRJNA599026_S_NODE_16552_length_250_cov_3.024876_g16096_i0 PRJNA599026 16552 250 3.024876 7.56219 root 1 Root_unresolved Root_unresolved 65.9 2.72e-10   NR KAL4170611.1 164328 g16096 i0 53.4 1.752 58 27 69.6 0 223 50 50 107 KAL4170611.1 hypothetical protein KRP22_008720 [Phytophthora ramorum] diamond 438 65.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
30472458 30472458 PRJNA599026_S_NODE_57473_length_165_cov_0.879310_g57017_i0 PRJNA599026 57473 165 0.87931 1.4508615 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00268   NR XP_012195839.1 695850 g57017 i0 52.1 1.74545454545455 48 23 87.3 0 158 15 244 291 XP_012195839.1 hypothetical protein SPRG_01883 [Saprolegnia parasitica CBS 223.65] diamond 288 44.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
30788316 30788316 PRJNA599026_S_NODE_50434_length_167_cov_1.296610_g49978_i0 PRJNA599026 50434 167 1.29661 2.1653387 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47.4 3.08e-4   NR KAF0684921.1 120398 g49978 i0 64.3 3.66467065868263 28 10 50.3 0 158 75 244 271 KAF0684921.1 hypothetical protein As57867_023094 [Aphanomyces stellatus] diamond 612 47.8 0.99163179916318 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
30933021 30933021 PRJNA599026_S_NODE_16434_length_251_cov_1.490099_g15978_i0 PRJNA599026 16434 251 1.490099 3.74014849 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 88.2 3.98e-18   NR DAZ96774.1 4803 g15978 i0 51.3 6.54980079681275 78 34 88.4 1 234 13 244 321 DAZ96774.1 TPA: hypothetical protein N0F65_005772 [Lagenidium giganteum] diamond 1644 88.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30978019 30978019 PRJNA599026_S_NODE_37954_length_185_cov_1.500000_g37498_i0 PRJNA599026 37954 185 1.5 2.775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 63.5 7.84e-10   NR OQR89771.1 74557 g37498 i0 68.3 5.93513513513513 41 13 66.5 0 39 161 507 547 OQR89771.1 cell division protease ftsH [Thraustotheca clavata] diamond 1098 63.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31185433 31185433 PRJNA599026_S_NODE_26215_length_211_cov_2.203704_g25759_i0 PRJNA599026 26215 211 2.203704 4.64981544 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 66.2 1.15e-10   NR CCI11263.1 65357 g25759 i0 52.5 5.37440758293839 59 28 83.9 0 211 35 52 110 CCI11263.1 unnamed protein product [Albugo candida] diamond 1134 66.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31216898 31216898 PRJNA599026_S_NODE_10535_length_302_cov_1.873518_g10079_i0 PRJNA599026 10535 302 1.873518 5.65802436 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.00181   NR XP_008607116.1 1156394 g10079 i0 32.6 0.854304635761589 86 56 83.4 1 288 37 760 845 XP_008607116.1 hypothetical protein SDRG_03263 [Saprolegnia diclina VS20] diamond 258 47.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31312146 31312146 PRJNA599026_S_NODE_44615_length_175_cov_1.063492_g44159_i0 PRJNA599026 44615 175 1.063492 1.861111 Phytophthora nicotianae P1 4792 SAR_Eukaryotes SAR_Eukaryotes 90.1 5.34e-21   NR ETP28243.1 1317064 g44159 i0 97.8 0.771428571428571 45 1 77.1 0 39 173 1 45 ETP28243.1 hypothetical protein F442_22471, partial [Phytophthora nicotianae P10297] diamond 135 90.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
31705096 31705096 PRJNA599026_S_NODE_9697_length_313_cov_4.431818_g9241_i0 PRJNA599026 9697 313 4.431818 13.87159034 Albugo 65356 SAR_Eukaryotes SAR_Eukaryotes 72.4 1.95e-12   NR CCI46740.1 65357 g9241 i0 51.6 1.22683706070288 64 29 59.4 1 313 128 191 254 CCI46740.1 unnamed protein product [Albugo candida] diamond 384 72.8 0.994505494505495 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32021470 32021470 PRJNA599026_S_NODE_10858_length_298_cov_1.638554_g10402_i0 PRJNA599026 10858 298 1.638554 4.88289092 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 82 8.24e-16   NR KAH9086107.1 100861 g10402 i0 44.4 3.03020134228188 99 50 94.6 2 284 3 31 129 KAH9086107.1 hypothetical protein LEN26_020434 [Aphanomyces euteiches] diamond 903 82.4 0.995145631067961 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32261503 32261503 PRJNA599026_S_NODE_16118_length_253_cov_1.250000_g15662_i0 PRJNA599026 16118 253 1.25 3.1625 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00322   NR RQM28249.1 112090 g15662 i0 39.7 2.07509881422925 68 40 79.4 1 231 31 112 179 RQM28249.1 hypothetical protein B5M09_000589, partial [Aphanomyces astaci] diamond 525 45.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32464570 32464570 PRJNA599026_S_NODE_12299_length_282_cov_4.480687_g11843_i0 PRJNA599026 12299 282 4.480687 12.63553734 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 73.2 1.03e-12   NR KUF83058.1 4792 g11843 i0 45.5 2.80851063829787 88 46 91.5 2 11 268 215 302 KUF83058.1 Phosphorylated adapter RNA export protein [Phytophthora nicotianae] diamond 792 73.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
32716849 32716849 PRJNA599026_S_NODE_67360_length_162_cov_0.902655_g66904_i0 PRJNA599026 67360 162 0.902655 1.4623011 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 40.8 0.0423   NR KAH9158741.1 100861 g66904 i0 81 1.55555555555556 21 4 38.9 0 136 74 63 83 KAH9158741.1 hypothetical protein LEN26_002753, partial [Aphanomyces euteiches] diamond 252 41.2 0.990291262135922 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;