RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA599026" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29922071 29922071 PRJNA599026_S_NODE_69031_length_161_cov_1.875000_g68575_i0 PRJNA599026 69031 161 1.875 3.01875 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00167   NR MES1909079.1 1215613 g68575 i0 41.2 0.950310559006211 51 30 95 0 6 158 6 56 MES1909079.1 hypothetical protein [Cercozoa sp. M6MM] diamond 153 43.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30079712 30079712 PRJNA599026_S_NODE_63152_length_163_cov_0.894737_g62696_i0 PRJNA599026 63152 163 0.894737 1.45842131 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 54.3 1.05e-6   NR MES1909155.1 1215613 g62696 i0 53.7 0.993865030674847 54 25 99.4 0 162 1 127 180 MES1909155.1 hypothetical protein [Cercozoa sp. M6MM] diamond 162 54.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;