RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA599026" and tax_phylum = "Candidatus Helarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Helarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA599026 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29479519 29479519 PRJNA599026_S_NODE_55750_length_166_cov_0.863248_g55294_i0 PRJNA599026 55750 166 0.863248 1.43299168 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 66.2 4.85e-11   NR MDD1777278.1 2719382 g55294 i0 56.4 0.993975903614458 55 24 99.4 0 2 166 7 61 MDD1777278.1 glycosyltransferase [Candidatus Helarchaeota archaeon] diamond 165 66.2 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon
29795432 29795432 PRJNA599026_S_NODE_7771_length_346_cov_2.498316_g7315_i0 PRJNA599026 7771 346 2.498316 8.64417336 Candidatus Helarchaeota archaeon 2719382 Archaea Archaea 52.4 3.31e-5   NR MDD1777279.1 2719382 g7315 i0 25.6 0.745664739884393 86 61 74.6 1 344 87 141 223 MDD1777279.1 glycosyltransferase [Candidatus Helarchaeota archaeon] diamond 258 52.4 1 Archaea   Promethearchaeati Candidatus Helarchaeota         Candidatus Helarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;