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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA599026" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA599026 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27111346 27111346 PRJNA599026_S_NODE_61822_length_164_cov_0.886957_g61366_i0 PRJNA599026 61822 164 0.886957 1.45460948 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 41.6 0.029   NR MFM9874552.1 2682144 g61366 i0 54.8 2.43292682926829 31 14 56.7 0 69 161 34 64 MFM9874552.1 peptide-methionine (S)-S-oxide reductase MsrA [Fimbriimonadaceae bacterium] diamond 399 41.6 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27553558 27553558 PRJNA599026_S_NODE_54964_length_166_cov_0.871795_g54508_i0 PRJNA599026 54964 166 0.871795 1.4471797 Armatimonadota bacterium 2033014 Bacteria Bacteria 63.9 4.4e-10   NR MBC8104559.1 2033014 g54508 i0 89.7 0.704819277108434 39 4 70.5 0 49 165 15 53 MBC8104559.1 (2Fe-2S)-binding protein [Armatimonadota bacterium] diamond 117 63.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27725402 27725402 PRJNA599026_S_NODE_2844_length_564_cov_3.681553_g2414_i0 PRJNA599026 2844 564 3.681553 20.76395892 Bacteria 2 Bacteria Bacteria 77.4 7.83e-13   NR MBS1722917.1 2033014 g2414 i0 61.5 1.38829787234043 52 20 27.7 0 338 493 432 483 MBS1722917.1 MmgE/PrpD family protein [Armatimonadota bacterium] diamond 783 77.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28501135 28501135 PRJNA599026_S_NODE_61187_length_164_cov_0.886957_g60731_i0 PRJNA599026 61187 164 0.886957 1.45460948 Armatimonadota bacterium 2033014 Bacteria Bacteria 81.3 4.63e-17   NR MBW3622093.1 2033014 g60731 i0 87.2 0.859756097560976 47 6 86 0 23 163 1 47 MBW3622093.1 response regulator transcription factor [Armatimonadota bacterium] diamond 141 81.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29038040 29038040 PRJNA599026_S_NODE_53848_length_166_cov_0.871795_g53392_i0 PRJNA599026 53848 166 0.871795 1.4471797 Capsulimonadales bacterium 2971800 Bacteria Bacteria 77.4 7.78e-15   NR MDX1933915.1 2971800 g53392 i0 75.9 0.975903614457831 54 13 97.6 0 2 163 311 364 MDX1933915.1 hypothetical protein [Capsulimonadales bacterium] diamond 162 77.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales     Capsulimonadales bacterium
29100989 29100989 PRJNA599026_S_NODE_10008_length_309_cov_1.900000_g9552_i0 PRJNA599026 10008 309 1.9 5.871 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 95.1 2.42e-20   NR MFN8219467.1 2682145 g9552 i0 86.7 0.883495145631068 45 6 43.7 0 86 220 357 401 MFN8219467.1 deoxyribodipyrimidine photo-lyase [Fimbriimonadales bacterium] diamond 273 95.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29763799 29763799 PRJNA599026_S_NODE_28451_length_205_cov_1.878205_g27995_i0 PRJNA599026 28451 205 1.878205 3.8503202500000002 Chthonomonadales bacterium 2282151 Bacteria Bacteria 45.1 0.00339   NR MCW3053210.1 2282151 g27995 i0 36.1 0.892682926829268 61 39 89.3 0 22 204 260 320 MCW3053210.1 phospholipase nuclease protein [Chthonomonadales bacterium] diamond 183 45.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
31216921 31216921 PRJNA599026_S_NODE_46535_length_172_cov_1.243902_g46079_i0 PRJNA599026 46535 172 1.243902 2.13951144 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 47.8 2.15e-4   NR MCW3097804.1 2739509 g46079 i0 51.9 1.86627906976744 52 24 90.7 1 1 156 60 110 MCW3097804.1 family channel protein [Chthonomonadaceae bacterium] diamond 321 47.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31375586 31375586 PRJNA599026_S_NODE_51076_length_167_cov_0.864407_g50620_i0 PRJNA599026 51076 167 0.864407 1.44355969 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.9 2.11e-14   NR MBW3636219.1 2033014 g50620 i0 66 0.952095808383233 53 17 95.2 1 167 9 238 289 MBW3636219.1 ABC transporter ATP-binding protein [Armatimonadota bacterium] diamond 159 75.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31438643 31438643 PRJNA599026_S_NODE_66676_length_162_cov_0.902655_g66220_i0 PRJNA599026 66676 162 0.902655 1.4623011 Armatimonadaceae bacterium 2933160 Bacteria Bacteria 87 3e-18   NR HVK06663.1 2933160 g66220 i0 73.6 0.981481481481482 53 14 98.1 0 3 161 793 845 HVK06663.1 glycoside hydrolase family 38 C-terminal domain-containing protein [Armatimonadaceae bacterium] diamond 159 87 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae   Armatimonadaceae bacterium
31547133 31547133 PRJNA599026_S_NODE_24756_length_215_cov_2.162651_g24300_i0 PRJNA599026 24756 215 2.162651 4.64969965 Bacteria 2 Bacteria Bacteria 107 4.7100000000000006e-27   NR MEZ0324280.1 1936159 g24300 i0 94.5 1.53488372093023 55 3 76.7 0 167 3 1 55 MEZ0324280.1 PIN domain-containing protein [Fimbriimonas sp.] diamond 330 108 0.990740740740741 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;