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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA599026" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 9 ✖

bioproject 1

  • PRJNA599026 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8225163 8225163 PRJNA599026_S_NODE_64847_length_163_cov_0.894737_g64391_i0 PRJNA599026 64847 163 0.894737 1.45842131 Cetobacterium 180162 Bacteria Bacteria 107 1.23e-25   NR WP_047381211.1 2630983 g64391 i0 98.1 1.98773006134969 54 1 99.4 0 162 1 24 77 WP_047381211.1 MULTISPECIES: methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO [unclassified Cetobacterium] diamond 324 107 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
26872039 26872039 PRJNA599026_S_NODE_5201_length_418_cov_2.197832_g4746_i0 PRJNA599026 5201 418 2.197832 9.18693776 Cetobacterium 180162 Bacteria Bacteria 111 2.07e-25   NR WP_240220714.1 188913 g4746 i0 41.9 5.84928229665072 136 74 96.9 3 14 418 539 670 WP_240220714.1 glycosyl hydrolase family 18 protein [Cetobacterium somerae] diamond 2445 111 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
27301226 27301226 PRJNA599026_S_NODE_64523_length_163_cov_0.894737_g64067_i0 PRJNA599026 64523 163 0.894737 1.45842131 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 107 1.7e-25   NR WP_294096797.1 527638 g64067 i0 100 0.993865030674847 54 0 99.4 0 1 162 200 253 WP_294096797.1 ABC transporter substrate-binding protein [uncultured Cetobacterium sp.] diamond 162 107 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
27775020 27775020 PRJNA599026_S_NODE_60624_length_164_cov_0.886957_g60168_i0 PRJNA599026 60624 164 0.886957 1.45460948 unclassified Cetobacterium 2630983 Bacteria Bacteria 107 3.03e-28   NR WP_047383851.1 2630983 g60168 i0 96.3 0.98780487804878 54 2 98.8 0 163 2 50 103 WP_047383851.1 MULTISPECIES: hypothetical protein [unclassified Cetobacterium] diamond 162 107 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
28893098 28893098 PRJNA599026_S_NODE_35908_length_189_cov_1.307143_g35452_i0 PRJNA599026 35908 189 1.307143 2.47050027 Cetobacterium 180162 Bacteria Bacteria 48.9 1.2e-4   NR WP_297599059.1 527638 g35452 i0 31.7 5 63 42 98.4 1 187 2 597 659 WP_297599059.1 glycosyl hydrolase family 18 protein [uncultured Cetobacterium sp.] diamond 945 49.3 0.991886409736308 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
29398404 29398404 PRJNA599026_S_NODE_1429_length_783_cov_3.735695_g1103_i0 PRJNA599026 1429 783 3.735695 29.25049185 Bacteria 2 Bacteria Bacteria 98.6 3.03e-19   NR WP_281833196.1 45622 g1103 i0 55.8 5.59386973180077 86 31 31.8 2 253 5 519 600 WP_281833196.1 glycosyl hydrolase family 18 protein [Propionigenium maris] diamond 4380 98.6 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Propionigenium Propionigenium maris
30978012 30978012 PRJNA599026_S_NODE_134_length_1979_cov_6.703627_g80_i0 PRJNA599026 134 1979 6.703627 132.66477833 Cetobacterium 180162 Bacteria Bacteria 424 5.53e-135   NR WP_240220714.1 188913 g80 i0 64.9 2.36634663971703 313 105 47.4 3 1239 301 449 756 WP_240220714.1 glycosyl hydrolase family 18 protein [Cetobacterium somerae] diamond 4683 424 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
31470541 31470541 PRJNA599026_S_NODE_60956_length_164_cov_0.886957_g60500_i0 PRJNA599026 60956 164 0.886957 1.45460948 uncultured Cetobacterium sp. 527638 Bacteria Bacteria 111 6.95e-27   NR WP_294095512.1 527638 g60500 i0 100 0.98780487804878 54 0 98.8 0 3 164 597 650 WP_294095512.1 transcription-repair coupling factor [uncultured Cetobacterium sp.] diamond 162 111 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium uncultured Cetobacterium sp.
32829541 32829541 PRJNA599026_S_NODE_27800_length_207_cov_1.291139_g27344_i0 PRJNA599026 27800 207 1.291139 2.67265773 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 73.2 4.28e-13   NR MBN1469292.1 2053555 g27344 i0 55.1 8.01449275362319 69 29 97.1 1 2 202 615 683 MBN1469292.1 endopeptidase La [Fusobacteriaceae bacterium] diamond 1659 73.2 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;