RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA597223" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA597223 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26984827 26984827 PRJNA597223_P_NODE_46742_length_205_cov_2.529412_g44896_i0 PRJNA597223 46742 205 2.529412 5.1852946 Apthili virus 3132807 Viruses Viruses 56.6 2.85e-7   NR WXB20447.1 3132807 g44896 i0 75.8 0.482926829268293 33 8 48.3 0 203 105 979 1011 WXB20447.1 MAG: putative RdRp, partial [Apthili virus] diamond 99 56.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Apthili virus
31438591 31438591 PRJNA597223_P_NODE_23496_length_326_cov_1.233677_g21652_i0 PRJNA597223 23496 326 1.233677 4.02178702 Apthili virus 3132807 Viruses Viruses 191 6.089999999999998e-54   NR WXB20447.1 3132807 g21652 i0 83.3 0.993865030674847 108 18 99.4 0 324 1 1354 1461 WXB20447.1 MAG: putative RdRp, partial [Apthili virus] diamond 324 191 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Apthili virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;