contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA597223" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7518654 | 7518654 | PRJNA597223_P_NODE_88066_length_150_cov_2.704348_g86220_i0 | PRJNA597223 | 88066 | 150 | 2.704348 | 4.056522 | Cetobacterium | 180162 | Bacteria | Bacteria | 85.5 | 2.22e-18 | NR | MEG0134624.1 | 2071632 | g86220 | i0 | 75 | 15.36 | 64 | 0 | 96 | 1 | 5 | 148 | 52 | 115 | MEG0134624.1 pyruvate:ferredoxin (flavodoxin) oxidoreductase [Cetobacterium sp.] | diamond | 2304 | 85.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium sp. | ||
| 26921652 | 26921652 | PRJNA597223_P_NODE_74042_length_165_cov_1.538462_g72196_i0 | PRJNA597223 | 74042 | 165 | 1.538462 | 2.5384623 | Cetobacterium sp. ZWU | 2071632 | Bacteria | Bacteria | 107 | 4.26e-28 | NR | WP_047382959.1 | 1340502 | g72196 | i0 | 98.1 | 0.981818181818182 | 54 | 1 | 98.2 | 0 | 162 | 1 | 48 | 101 | WP_047382959.1 Dps family protein [Cetobacterium sp. ZWU0022] | diamond | 162 | 107 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium sp. ZWU0022 | ||
| 27756829 | 27756829 | PRJNA597223_P_NODE_86524_length_151_cov_2.862069_g84678_i0 | PRJNA597223 | 86524 | 151 | 2.862069 | 4.32172419 | FCB group | 1783270 | Bacteria | Bacteria | 50.8 | 6.34e-6 | NR | WP_204640026.1 | 860 | g84678 | i0 | 54.2 | 2.90066225165563 | 48 | 21 | 93.4 | 1 | 147 | 7 | 119 | 166 | WP_204640026.1 YfbM family protein [Fusobacterium periodonticum] | diamond | 438 | 50.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 29542837 | 29542837 | PRJNA597223_P_NODE_40350_length_225_cov_1.957895_g38504_i0 | PRJNA597223 | 40350 | 225 | 1.957895 | 4.40526375 | unclassified Cetobacterium | 2630983 | Bacteria | Bacteria | 72.4 | 1e-12 | NR | WP_047384462.1 | 2630983 | g38504 | i0 | 100 | 0.48 | 36 | 0 | 48 | 0 | 116 | 223 | 81 | 116 | WP_047384462.1 MULTISPECIES: Ppx/GppA family phosphatase [unclassified Cetobacterium] | diamond | 108 | 72.4 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | |||
| 30693470 | 30693470 | PRJNA597223_P_NODE_54073_length_190_cov_1.954839_g52227_i0 | PRJNA597223 | 54073 | 190 | 1.954839 | 3.7141941 | Cetobacterium | 180162 | Bacteria | Bacteria | 48.1 | 1.91e-4 | NR | XLD83163.1 | 188913 | g52227 | i0 | 95.7 | 2.17894736842105 | 23 | 1 | 36.3 | 0 | 184 | 116 | 21 | 43 | XLD83163.1 DegV family protein [Cetobacterium somerae] | diamond | 414 | 48.1 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 31610256 | 31610256 | PRJNA597223_P_NODE_32016_length_263_cov_1.425439_g30170_i0 | PRJNA597223 | 32016 | 263 | 1.425439 | 3.74890457 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 3.65e-7 | NR | WP_369225850.1 | 76859 | g30170 | i0 | 46.4 | 3.98098859315589 | 56 | 26 | 59.3 | 1 | 108 | 263 | 3 | 58 | WP_369225850.1 helix-turn-helix domain-containing protein, partial [Fusobacterium animalis] | diamond | 1047 | 53.5 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium animalis | ||
| 32451308 | 32451308 | PRJNA597223_P_NODE_55139_length_189_cov_2.142857_g53293_i0 | PRJNA597223 | 55139 | 189 | 2.142857 | 4.04999973 | Cetobacterium | 180162 | Bacteria | Bacteria | 50.1 | 4.71e-5 | NR | WP_023051519.1 | 180162 | g53293 | i0 | 95.8 | 0.380952380952381 | 24 | 1 | 38.1 | 0 | 6 | 77 | 547 | 570 | WP_023051519.1 MULTISPECIES: DNA-directed RNA polymerase subunit beta [Cetobacterium] | diamond | 72 | 50.1 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;