contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA597223" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4397299 | 4397299 | PRJNA597223_S_NODE_444_length_405_cov_1.800546_g387_i0 | PRJNA597223 | 444 | 405 | 1.800546 | 7.2922113 | Chlorellaceae | 35461 | Plants | Plants | 249 | 1.08e-81 | NR | PSC76847.1 | 554055 | g387 | i0 | 89.6 | 4.99259259259259 | 134 | 14 | 99.3 | 0 | 2 | 403 | 17 | 150 | PSC76847.1 mitochondrial import inner membrane translocase subunit TIM17-2-like [Micractinium conductrix] | diamond | 2022 | 251 | 0.99203187250996006 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Micractinium | Micractinium conductrix | |
| 20971300 | 20971300 | PRJNA597223_P_NODE_35897_length_243_cov_1.524038_g34051_i0 | PRJNA597223 | 35897 | 243 | 1.524038 | 3.70341234 | Eukaryota | 2759 | Plants | Plants | 120 | 4.06e-32 | NR | CAD7699794.1 | 121088 | g34051 | i0 | 67.5 | 3.91358024691358 | 80 | 26 | 98.8 | 0 | 242 | 3 | 98 | 177 | CAD7699794.1 unnamed protein product [Ostreobium quekettii] | diamond | 951 | 121 | 0.991735537190083 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Ostreobiaceae | Ostreobium | Ostreobium quekettii | |
| 24795775 | 24795775 | PRJNA597223_S_NODE_2600_length_191_cov_1.447368_g2543_i0 | PRJNA597223 | 2600 | 191 | 1.447368 | 2.76447288 | Coccomyxa sp. Obi | 2315456 | Plants | Plants | 112 | 3.03e-28 | NR | BDA46065.1 | 2315456 | g2543 | i0 | 88.9 | 1.96335078534031 | 63 | 7 | 99 | 0 | 189 | 1 | 78 | 140 | BDA46065.1 40S ribosomal protein S8 [Coccomyxa sp. Obi] | diamond | 375 | 112 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa sp. Obi | ||
| 28248212 | 28248212 | PRJNA597223_P_NODE_45246_length_209_cov_2.494253_g43400_i0 | PRJNA597223 | 45246 | 209 | 2.494253 | 5.21298877 | Myrmecia israelensis | 3171 | Plants | Plants | 45.8 | 8.09e-4 | NR | XAI67159.1 | 3171 | g43400 | i0 | 48.4 | 2.09569377990431 | 62 | 26 | 87.6 | 3 | 203 | 21 | 14 | 70 | XAI67159.1 ribosomal protein S10 [Myrmecia israelensis] | diamond | 438 | 45.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Myrmecia | Myrmecia israelensis | |
| 28248219 | 28248219 | PRJNA597223_P_NODE_55086_length_189_cov_2.181818_g53240_i0 | PRJNA597223 | 55086 | 189 | 2.181818 | 4.12363602 | Ostreobium quekettii | 121088 | Plants | Plants | 59.7 | 2.53e-9 | NR | YP_009720773.1 | 121088 | g53240 | i0 | 47.1 | 0.80952380952381 | 51 | 27 | 81 | 0 | 2 | 154 | 36 | 86 | YP_009720773.1 putative LAGLIDADG endonuclease [Ostreobium quekettii] | diamond | 153 | 59.7 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Ostreobiaceae | Ostreobium | Ostreobium quekettii | |
| 30711727 | 30711727 | PRJNA597223_S_NODE_5014_length_152_cov_1.654867_g4957_i0 | PRJNA597223 | 5014 | 152 | 1.654867 | 2.51539784 | Chlorella vulgaris | 3077 | Plants | Plants | 40.8 | 0.0498 | NR | KAI3433415.1 | 3077 | g4957 | i0 | 77.3 | 0.434210526315789 | 22 | 5 | 43.4 | 0 | 87 | 152 | 1 | 22 | KAI3433415.1 hypothetical protein D9Q98_003230 [Chlorella vulgaris] | diamond | 66 | 40.8 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella vulgaris | |
| 30964658 | 30964658 | PRJNA597223_S_NODE_2774_length_186_cov_2.333333_g2717_i0 | PRJNA597223 | 2774 | 186 | 2.333333 | 4.33999938 | Prototheca wickerhamii | 3111 | Plants | Plants | 63.2 | 2.45e-10 | NR | KAK2075825.1 | 3111 | g2717 | i0 | 100 | 0.467741935483871 | 29 | 0 | 46.8 | 0 | 1 | 87 | 152 | 180 | KAK2075825.1 hypothetical protein QBZ16_001566 [Prototheca wickerhamii] | diamond | 87 | 63.2 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Prototheca | Prototheca wickerhamii | |
| 32229745 | 32229745 | PRJNA597223_P_NODE_46498_length_206_cov_1.730994_g44652_i0 | PRJNA597223 | 46498 | 206 | 1.730994 | 3.56584764 | Chlorella vulgaris | 3077 | Plants | Plants | 80.5 | 1.15e-15 | NR | KAI3429398.1 | 3077 | g44652 | i0 | 56.7 | 2.92718446601942 | 67 | 27 | 94.7 | 1 | 195 | 1 | 136 | 202 | KAI3429398.1 hypothetical protein D9Q98_005493 [Chlorella vulgaris] | diamond | 603 | 80.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella vulgaris | |
| 32261475 | 32261475 | PRJNA597223_P_NODE_26698_length_299_cov_0.981061_g24853_i0 | PRJNA597223 | 26698 | 299 | 0.981061 | 2.93337239 | Ostreobium quekettii | 121088 | Plants | Plants | 49.7 | 4.04e-5 | NR | YP_009720772.1 | 121088 | g24853 | i0 | 38.5 | 0.782608695652174 | 78 | 42 | 74.2 | 2 | 298 | 77 | 6 | 81 | YP_009720772.1 putative LAGLIDADG DNA endonuclease [Ostreobium quekettii] | diamond | 234 | 49.7 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Ostreobiaceae | Ostreobium | Ostreobium quekettii | |
| 32609065 | 32609065 | PRJNA597223_P_NODE_36380_length_241_cov_1.067961_g34534_i0 | PRJNA597223 | 36380 | 241 | 1.067961 | 2.57378601 | Edaphochlamys debaryana | 47281 | Plants | Plants | 57 | 1.03e-7 | NR | KAG2497223.1 | 47281 | g34534 | i0 | 34.1 | 2.19087136929461 | 88 | 49 | 98.3 | 1 | 3 | 239 | 1 | 88 | KAG2497223.1 hypothetical protein HYH03_004812 [Edaphochlamys debaryana] | diamond | 528 | 57 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Edaphochlamys | Edaphochlamys debaryana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;