RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA596870" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA596870 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26699786 26699786 PRJNA596870_P_NODE_39761_length_241_cov_0.916667_g39628_i0 PRJNA596870 39761 241 0.916667 2.20916747 Planctomycetota bacterium 2026780 Bacteria Bacteria 116 9.539999999999999e-30   NR RLS52573.1 2026780 g39628 i0 81.7 0.883817427385892 71 8 82.2 1 44 241 171 241 RLS52573.1 MAG: 4-hydroxy-tetrahydrodipicolinate synthase [Planctomycetota bacterium] diamond 213 116 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27364609 27364609 PRJNA596870_P_NODE_36563_length_244_cov_0.900585_g36430_i0 PRJNA596870 36563 244 0.900585 2.1974274 Sedimentisphaerales bacterium 2813034 Bacteria Bacteria 42.4 0.0299   NR MBN2591566.1 2813034 g36430 i0 36.7 0.971311475409836 79 41 97.1 2 2 238 43 112 MBN2591566.1 ferritin family protein [Sedimentisphaerales bacterium] diamond 237 42.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Sedimentisphaerales     Sedimentisphaerales bacterium
31470482 31470482 PRJNA596870_P_NODE_35116_length_246_cov_0.890173_g34983_i0 PRJNA596870 35116 246 0.890173 2.18982558 Planctomycetota bacterium 2026780 Bacteria Bacteria 67 1.65e-11   NR MBI2806288.1 2026780 g34983 i0 80 0.426829268292683 35 7 42.7 0 106 2 1 35 MBI2806288.1 hypothetical protein [Planctomycetota bacterium] diamond 105 67 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32324788 32324788 PRJNA596870_P_NODE_11459_length_377_cov_1.009868_g11326_i0 PRJNA596870 11459 377 1.009868 3.80720236 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.0317   NR MEM9251186.1 2026780 g11326 i0 29.3 1.05835543766578 133 83 97.9 4 375 7 133 264 MEM9251186.1 hypothetical protein [Planctomycetota bacterium] diamond 399 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;