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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA596870" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA596870 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3119339 3119339 PRJNA596870_P_NODE_23723_length_278_cov_1.229268_g23590_i0 PRJNA596870 23723 278 1.229268 3.41736504 Bacteroidales bacterium 2030927 Bacteria Bacteria 94.7 7.200000000000001e-22   NR MBO7546915.1 2030927 g23590 i0 86.5 1.12230215827338 52 7 56.1 0 2 157 149 200 MBO7546915.1 30S ribosomal protein S4 [Bacteroidales bacterium] diamond 312 94.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
8221324 8221324 PRJNA596870_P_NODE_13007_length_358_cov_1.077193_g12874_i0 PRJNA596870 13007 358 1.077193 3.85635094 Spongiivirga citrea 1481457 Bacteria Bacteria 79 2.84e-14   NR WP_164029204.1 1481457 g12874 i0 43.4 0.946927374301676 113 51 94.7 3 15 353 841 940 WP_164029204.1 fasciclin domain-containing protein [Spongiivirga citrea] diamond 339 79 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Spongiivirga Spongiivirga citrea
26604763 26604763 PRJNA596870_P_NODE_35701_length_245_cov_0.895349_g35568_i0 PRJNA596870 35701 245 0.895349 2.19360505 Bacteroidales bacterium 2030927 Bacteria Bacteria 162 2.46e-44   NR MFO7827238.1 2030927 g35568 i0 97.6 1.00408163265306 82 1 99.2 1 243 1 930 1011 MFO7827238.1 reverse transcriptase domain-containing protein [Bacteroidales bacterium] diamond 246 162 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
27332857 27332857 PRJNA596870_P_NODE_21183_length_291_cov_0.922018_g21050_i0 PRJNA596870 21183 291 0.922018 2.68307238 Bacteroidales bacterium 2030927 Bacteria Bacteria 188 2.45e-53   NR MFO7829217.1 2030927 g21050 i0 95.8 0.989690721649485 96 4 99 0 2 289 528 623 MFO7829217.1 reverse transcriptase family protein [Bacteroidales bacterium] diamond 288 188 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
28659008 28659008 PRJNA596870_P_NODE_22087_length_286_cov_1.446009_g21954_i0 PRJNA596870 22087 286 1.446009 4.13558574 Bacteroidales bacterium 2030927 Bacteria Bacteria 48.5 5.98e-4   NR MDD2529612.1 2030927 g21954 i0 48.1 1.09090909090909 52 25 54.5 2 98 253 236 285 MDD2529612.1 DNA polymerase III subunit alpha [Bacteroidales bacterium] diamond 312 48.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
28911138 28911138 PRJNA596870_P_NODE_33288_length_247_cov_1.563218_g33155_i0 PRJNA596870 33288 247 1.563218 3.86114846 Myroides sp. 1874736 Bacteria Bacteria 164 1.68e-45   NR MEG1377069.1 1874736 g33155 i0 95.1 0.995951417004049 82 4 99.6 0 2 247 180 261 MEG1377069.1 TonB-dependent receptor [Myroides sp.] diamond 246 164 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Myroides Myroides sp.
29511208 29511208 PRJNA596870_P_NODE_29350_length_251_cov_0.865169_g29217_i0 PRJNA596870 29350 251 0.865169 2.17157419 Paraprevotella clara 454154 Bacteria Bacteria 152 4.75e-44   NR WP_302979927.1 454154 g29217 i0 97.1 0.836653386454183 70 2 83.7 0 251 42 182 251 WP_302979927.1 hypothetical protein [Paraprevotella clara] diamond 210 152 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella clara
29574277 29574277 PRJNA596870_P_NODE_8250_length_434_cov_1.066482_g8117_i0 PRJNA596870 8250 434 1.066482 4.62853188 Bacteroidales bacterium 2030927 Bacteria Bacteria 150 9.61e-42   NR MFO7844438.1 2030927 g8117 i0 46.9 1.00230414746544 145 76 99.5 1 434 3 132 276 MFO7844438.1 endonuclease/exonuclease/phosphatase family protein [Bacteroidales bacterium] diamond 435 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
29795366 29795366 PRJNA596870_P_NODE_39691_length_241_cov_0.916667_g39558_i0 PRJNA596870 39691 241 0.916667 2.20916747 Chryseobacterium piscicola 551459 Bacteria Bacteria 167 3.0099999999999998e-52   NR WP_076452933.1 551459 g39558 i0 96.2 0.970954356846473 78 3 97.1 0 236 3 1 78 WP_076452933.1 virulence factor [Chryseobacterium piscicola] diamond 234 167 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium piscicola
30016745 30016745 PRJNA596870_P_NODE_31311_length_249_cov_0.875000_g31178_i0 PRJNA596870 31311 249 0.875 2.17875 Bacteroidetes bacterium ADurb.Bin4 1898104 Bacteria Bacteria 72 1.35e-12   NR OPZ97063.1 1852813 g31178 i0 44.9 0.939759036144578 78 43 94 0 242 9 124 201 OPZ97063.1 MAG: GIY-YIG catalytic domain protein [Bacteroidetes bacterium ADurb.Bin408] diamond 234 72 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidetes bacterium ADurb.Bin408
30079648 30079648 PRJNA596870_P_NODE_26752_length_262_cov_1.629630_g26619_i0 PRJNA596870 26752 262 1.62963 4.2696306 Segetibacter sp. 2231182 Bacteria Bacteria 120 6.39e-33   NR MEJ7681046.1 2231182 g26619 i0 69 1.99236641221374 87 27 99.6 0 1 261 1 87 MEJ7681046.1 hypothetical protein [Segetibacter sp.] diamond 522 120 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Segetibacter Segetibacter sp.
30585196 30585196 PRJNA596870_P_NODE_8573_length_426_cov_1.682720_g8440_i0 PRJNA596870 8573 426 1.68272 7.1683872 Gramella sp. MT6 2705471 Bacteria Bacteria 45.8 0.0202   NR WP_219550722.1 2705471 g8440 i0 40.3 1.01408450704225 62 33 40.8 1 187 360 439 500 WP_219550722.1 class I adenylate-forming enzyme family protein [Gramella sp. MT6] diamond 432 45.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Christiangramia Gramella sp. MT6
30679914 30679914 PRJNA596870_P_NODE_28473_length_253_cov_1.711111_g28340_i0 PRJNA596870 28473 253 1.711111 4.32911083 Proteiniphilum acetatigenes 294710 Bacteria Bacteria 180 5.39e-52   NR WP_019541377.1 294710 g28340 i0 100 1.96837944664032 83 0 98.4 0 251 3 21 103 WP_019541377.1 RagB/SusD family nutrient uptake outer membrane protein [Proteiniphilum acetatigenes] diamond 498 180 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae Proteiniphilum Proteiniphilum acetatigenes
30788302 30788302 PRJNA596870_P_NODE_16894_length_321_cov_1.241935_g16761_i0 PRJNA596870 16894 321 1.241935 3.98661135 Prevotella 838 Bacteria Bacteria 44.3 0.0264   NR MCR5131956.1 59823 g16761 i0 41.5 2.74766355140187 53 28 47.7 2 152 304 226 277 MCR5131956.1 glycoside hydrolase family 9 protein [Prevotella sp.] diamond 882 44.7 0.991051454138702 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp.
31185390 31185390 PRJNA596870_P_NODE_32575_length_248_cov_0.880000_g32442_i0 PRJNA596870 32575 248 0.88 2.1824 Cytophagaceae bacterium 2026729 Bacteria Bacteria 45.4 0.00323   NR HSZ25010.1 2026729 g32442 i0 39.3 0.67741935483871 56 33 67.7 1 46 213 132 186 HSZ25010.1 hypothetical protein [Cytophagaceae bacterium] diamond 168 45.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae   Cytophagaceae bacterium
31438581 31438581 PRJNA596870_P_NODE_33716_length_247_cov_0.885057_g33583_i0 PRJNA596870 33716 247 0.885057 2.18609079 Fibrella sp. GW2-5 3242487 Bacteria Bacteria 50.1 1.08e-4   NR WP_370721328.1 3242487 g33583 i0 38.2 0.825910931174089 68 42 82.6 0 41 244 3514 3581 WP_370721328.1 SdrD B-like domain-containing protein [Fibrella sp. GW2-5] diamond 204 50.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Fibrella Fibrella aquatica
31565405 31565405 PRJNA596870_P_NODE_32136_length_248_cov_2.394286_g32003_i0 PRJNA596870 32136 248 2.394286 5.93782928 Paenimyroides marinum 1159016 Bacteria Bacteria 108 1.78e-25   NR WP_177165112.1 1159016 g32003 i0 62.5 0.967741935483871 80 29 96.8 1 4 243 42 120 WP_177165112.1 GEVED domain-containing protein, partial [Paenimyroides marinum] diamond 240 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Paenimyroides Paenimyroides marinum
31628412 31628412 PRJNA596870_P_NODE_34596_length_246_cov_0.890173_g34463_i0 PRJNA596870 34596 246 0.890173 2.18982558 Flavobacterium sp. 239 Bacteria Bacteria 47.8 3.21e-4   NR WP_298138790.1 239 g34463 i0 45.1 1.46341463414634 51 28 62.2 0 157 5 29 79 WP_298138790.1 ankyrin repeat domain-containing protein [Flavobacterium sp.] diamond 360 47.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
31944600 31944600 PRJNA596870_P_NODE_9537_length_407_cov_1.844311_g9404_i0 PRJNA596870 9537 407 1.844311 7.50634577 Bacteroidales bacterium 2030927 Bacteria Bacteria 132 9.81e-33   NR MFO7827122.1 2030927 g9404 i0 51.9 0.995085995085995 135 64 98.8 1 2 403 839 973 MFO7827122.1 reverse transcriptase family protein [Bacteroidales bacterium] diamond 405 132 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
32071322 32071322 PRJNA596870_P_NODE_38078_length_243_cov_0.905882_g37945_i0 PRJNA596870 38078 243 0.905882 2.20129326 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 92.8 4.22e-21   NR WP_308130976.1 165435 g37945 i0 90.2 1.25925925925926 51 5 63 0 1 153 172 222 WP_308130976.1 hypothetical protein [uncultured Flavobacterium sp.] diamond 306 92.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
32166441 32166441 PRJNA596870_P_NODE_37138_length_244_cov_0.900585_g37005_i0 PRJNA596870 37138 244 0.900585 2.1974274 Psychroflexus sp. 1921580 Bacteria Bacteria 53.5 6.05e-6   NR MFO7744505.1 1921580 g37005 i0 40.2 1.79508196721311 82 46 99.6 2 2 244 830 909 MFO7744505.1 reverse transcriptase family protein [Psychroflexus sp.] diamond 438 53.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Psychroflexus Psychroflexus sp.
32261467 32261467 PRJNA596870_P_NODE_36218_length_245_cov_0.895349_g36085_i0 PRJNA596870 36218 245 0.895349 2.19360505 Psychroflexus sp. 1921580 Bacteria Bacteria 67.4 7.9e-11   NR MFO7744505.1 1921580 g36085 i0 40.8 0.930612244897959 76 42 91.8 2 2 226 816 889 MFO7744505.1 reverse transcriptase family protein [Psychroflexus sp.] diamond 228 67.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Psychroflexus Psychroflexus sp.
32293199 32293199 PRJNA596870_P_NODE_23979_length_276_cov_2.201970_g23846_i0 PRJNA596870 23979 276 2.20197 6.0774372 Paraflavisolibacter caeni 2982496 Bacteria Bacteria 165 2.34e-49   NR WP_279295959.1 2982496 g23846 i0 89 0.989130434782609 91 10 98.9 0 275 3 76 166 WP_279295959.1 rhomboid family intramembrane serine protease [Paraflavisolibacter caeni] diamond 273 165 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Paraflavisolibacter Paraflavisolibacter caeni
32860898 32860898 PRJNA596870_P_NODE_31420_length_249_cov_0.875000_g31287_i0 PRJNA596870 31420 249 0.875 2.17875 Alistipes intestinihominis 3133172 Bacteria Bacteria 164 3.55e-49   NR WP_349094085.1 3133172 g31287 i0 100 1 83 0 100 0 249 1 111 193 WP_349094085.1 acyl carrier protein [Alistipes intestinihominis] diamond 249 164 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes intestinihominis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;