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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA596867" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA596867 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12047162 12047162 PRJNA596867_P_NODE_15110_length_241_cov_0.916667_g15035_i0 PRJNA596867 15110 241 0.916667 2.20916747 Meloidogyne 189290 Nematoda Nematoda 167 4.55e-49   NR KAF7634656.1 189291 g15035 i0 98.7 1.96680497925311 79 1 98.3 0 239 3 193 271 KAF7634656.1 Flavoprotein domain-containing protein [Meloidogyne graminicola] diamond 474 167 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
16443137 16443137 PRJNA596867_P_NODE_12613_length_248_cov_0.880000_g12538_i0 PRJNA596867 12613 248 0.88 2.1824 Meloidogyne enterolobii 390850 Nematoda Nematoda 166 1.17e-49   NR CAK5036759.1 390850 g12538 i0 97.6 0.991935483870968 82 2 99.2 0 3 248 138 219 CAK5036759.1 unnamed protein product [Meloidogyne enterolobii] diamond 246 166 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
26984806 26984806 PRJNA596867_P_NODE_12962_length_247_cov_0.885057_g12887_i0 PRJNA596867 12962 247 0.885057 2.18609079 Meloidogyne enterolobii 390850 Nematoda Nematoda 159 4.279999999999999e-46   NR CAK5077684.1 390850 g12887 i0 91.5 2.98785425101215 82 7 99.6 0 247 2 180 261 CAK5077684.1 unnamed protein product [Meloidogyne enterolobii] diamond 738 159 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
27522086 27522086 PRJNA596867_P_NODE_12943_length_247_cov_0.885057_g12868_i0 PRJNA596867 12943 247 0.885057 2.18609079 Meloidogyne graminicola 189291 Nematoda Nematoda 166 3.2599999999999996e-48   NR KAF7623409.1 189291 g12868 i0 93.9 1.9919028340081 82 5 99.6 0 247 2 259 340 KAF7623409.1 hypothetical protein Mgra_00010268 [Meloidogyne graminicola] diamond 492 166 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
28911121 28911121 PRJNA596867_P_NODE_13228_length_246_cov_0.890173_g13153_i0 PRJNA596867 13228 246 0.890173 2.18982558 Meloidogyne enterolobii 390850 Nematoda Nematoda 130 2.35e-33   NR CAK5082748.1 390850 g13153 i0 85.1 0.902439024390244 74 10 89 1 219 1 5 78 CAK5082748.1 unnamed protein product [Meloidogyne enterolobii] diamond 222 130 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
29985066 29985066 PRJNA596867_P_NODE_13171_length_246_cov_0.890173_g13096_i0 PRJNA596867 13171 246 0.890173 2.18982558 Teladorsagia circumcincta 45464 Nematoda Nematoda 43.1 0.0268   NR PIO58181.1 45464 g13096 i0 42.6 0.573170731707317 47 25 57.3 1 180 40 60 104 PIO58181.1 hypothetical protein TELCIR_20389, partial [Teladorsagia circumcincta] diamond 141 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Teladorsagia Teladorsagia circumcincta
31691675 31691675 PRJNA596867_P_NODE_11837_length_250_cov_0.870056_g11762_i0 PRJNA596867 11837 250 0.870056 2.17514 Meloidogyne enterolobii 390850 Nematoda Nematoda 164 1.26e-48   NR CAK5090020.1 390850 g11762 i0 95.2 1.992 83 4 99.6 0 2 250 113 195 CAK5090020.1 unnamed protein product [Meloidogyne enterolobii] diamond 498 164 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32324785 32324785 PRJNA596867_P_NODE_13139_length_246_cov_0.890173_g13064_i0 PRJNA596867 13139 246 0.890173 2.18982558 Meloidogyne enterolobii 390850 Nematoda Nematoda 153 5.89e-41   NR CAD2167522.1 390850 g13064 i0 90.1 2.96341463414634 81 8 98.8 0 245 3 1436 1516 CAD2167522.1 unnamed protein product [Meloidogyne enterolobii] diamond 729 153 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32514603 32514603 PRJNA596867_P_NODE_12879_length_247_cov_0.885057_g12804_i0 PRJNA596867 12879 247 0.885057 2.18609079 Meloidogyne enterolobii 390850 Nematoda Nematoda 118 7.01e-29   NR CAK5072204.1 390850 g12804 i0 80.2 1.96761133603239 81 16 98.4 0 245 3 551 631 CAK5072204.1 unnamed protein product [Meloidogyne enterolobii] diamond 486 118 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32640250 32640250 PRJNA596867_P_NODE_13160_length_246_cov_0.890173_g13085_i0 PRJNA596867 13160 246 0.890173 2.18982558 Meloidogyne enterolobii 390850 Nematoda Nematoda 115 5.18e-28   NR CAD2202830.1 390850 g13085 i0 78.2 0.951219512195122 78 16 93.9 1 231 1 1 78 CAD2202830.1 unnamed protein product [Meloidogyne enterolobii] diamond 234 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
32703370 32703370 PRJNA596867_P_NODE_15160_length_241_cov_0.916667_g15085_i0 PRJNA596867 15160 241 0.916667 2.20916747 Meloidogyne enterolobii 390850 Nematoda Nematoda 149 1.4799999999999998e-42   NR CAD2179484.1 390850 g15085 i0 96.2 0.983402489626556 79 3 98.3 0 239 3 13 91 CAD2179484.1 unnamed protein product [Meloidogyne enterolobii] diamond 237 149 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;