RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA596867" and tax_phylum = "Negarnaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA596867 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27332854 27332854 PRJNA596867_P_NODE_12363_length_248_cov_1.440000_g12288_i0 PRJNA596867 12363 248 1.44 3.5712 African cichlid piscichuvirus 3065075 Viruses Viruses 62.8 3.55e-9   NR UVF58767.1 3065075 g12288 i0 45.9 0.895161290322581 74 39 88.3 1 247 29 6 79 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 222 62.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
29511198 29511198 PRJNA596867_P_NODE_2890_length_432_cov_2.980501_g2815_i0 PRJNA596867 2890 432 2.980501 12.87576432 African cichlid piscichuvirus 3065075 Viruses Viruses 127 7.81e-31   NR WLN26256.1 3065075 g2815 i0 46 0.951388888888889 137 74 95.1 0 413 3 97 233 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 411 127 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
31863036 31863036 PRJNA596867_P_NODE_15477_length_229_cov_2.730769_g15402_i0 PRJNA596867 15477 229 2.730769 6.25346101 Chuvivirus 2842604 Viruses Viruses 114 9.15e-28   NR WET19887.1 2842604 g15402 i0 69.7 1.99126637554585 76 23 99.6 0 2 229 297 372 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 456 114 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;