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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA594101" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA594101 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3118028 3118028 PRJNA594101_S_NODE_323_length_2039_cov_4.798576_g257_i0 PRJNA594101 323 2039 4.798576 97.84296464 Desulfosediminicola flagellatus 2569541 Bacteria Bacteria 339 7.509999999999998e-103   NR WP_136806095.1 2569541 g257 i0 37.5 4.01667484060814 536 321 77.7 6 71 1654 20 549 WP_136806095.1 5-histidylcysteine sulfoxide synthase [Desulfosediminicola flagellatus] diamond 8190 339 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfosediminicola Desulfosediminicola flagellatus
4394681 4394681 PRJNA594101_S_NODE_39284_length_277_cov_2.225490_g38982_i0 PRJNA594101 39284 277 2.22549 6.1646073 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 142 2.42e-41   NR GJM17742.1 2202153 g38982 i0 84.8 0.996389891696751 92 13 99.6 1 1 276 30 120 GJM17742.1 MAG: hypothetical protein DHS20C13_30690 [Thermodesulfobacteriota bacterium] diamond 276 142 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
26794987 26794987 PRJNA594101_S_NODE_44541_length_262_cov_1.084656_g44239_i0 PRJNA594101 44541 262 1.084656 2.84179872 Solidesulfovibrio sp. 2910990 Bacteria Bacteria 46.6 0.0021   NR WP_300158423.1 2910990 g44239 i0 36.1 0.824427480916031 72 43 82.4 1 240 25 223 291 WP_300158423.1 EAL and GGDEF domain-containing protein [Solidesulfovibrio sp.] diamond 216 46.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Solidesulfovibrio Solidesulfovibrio sp.
26858666 26858666 PRJNA594101_S_NODE_56041_length_242_cov_3.526627_g55739_i0 PRJNA594101 56041 242 3.526627 8.53443734 Desulfobacterales bacterium 2044940 Bacteria Bacteria 69.7 1.01e-11   NR MCJ7748340.1 2044940 g55739 i0 44.2 0.954545454545455 77 41 93 1 3 227 17 93 MCJ7748340.1 CoA transferase [Desulfobacterales bacterium] diamond 231 69.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
26872016 26872016 PRJNA594101_S_NODE_30061_length_312_cov_1.543933_g29759_i0 PRJNA594101 30061 312 1.543933 4.81707096 Pseudomonadati 3379134 Bacteria Bacteria 73.6 1.23e-12   NR MEA1901565.1 2202153 g29759 i0 38.8 3.53846153846154 98 52 94.2 1 9 302 447 536 MEA1901565.1 C1 family peptidase [Thermodesulfobacteriota bacterium] diamond 1104 74.3 0.990578734858681 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
26921558 26921558 PRJNA594101_S_NODE_2682_length_960_cov_1.979707_g2469_i0 PRJNA594101 2682 960 1.979707 19.0051872 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 77.8 9.27e-12   NR HAO22905.1 2049433 g2469 i0 30.2 1.071875 129 86 39.7 3 578 958 3 129 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 1029 77.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27630437 27630437 PRJNA594101_S_NODE_32764_length_301_cov_1.118421_g32462_i0 PRJNA594101 32764 301 1.118421 3.36644721 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 57.8 3.59e-7   NR HEX2964797.1 2660714 g32462 i0 41.3 3.87707641196013 80 46 79.7 1 1 240 149 227 HEX2964797.1 AAA family ATPase [Syntrophorhabdaceae bacterium] diamond 1167 57.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae   Syntrophorhabdaceae bacterium
27661995 27661995 PRJNA594101_S_NODE_37884_length_282_cov_1.435407_g37582_i0 PRJNA594101 37884 282 1.435407 4.04784774 Pseudomonadati 3379134 Bacteria Bacteria 45.8 0.00436   NR WP_011940165.1 351604 g37582 i0 57.6 0.723404255319149 33 14 35.1 0 126 28 121 153 WP_011940165.1 DUF547 domain-containing protein [Geotalea uraniireducens] diamond 204 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea uraniireducens
27837685 27837685 PRJNA594101_S_NODE_28464_length_319_cov_3.609756_g28162_i0 PRJNA594101 28464 319 3.609756 11.51512164 Syntrophales bacterium 2928017 Bacteria Bacteria 55.1 4.16e-6   NR MFA5183239.1 2928017 g28162 i0 42.2 1.94670846394984 64 36 59.2 1 318 130 456 519 MFA5183239.1 FAD-dependent oxidoreductase [Syntrophales bacterium] diamond 621 55.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
28293210 28293210 PRJNA594101_S_NODE_54286_length_244_cov_3.959064_g53984_i0 PRJNA594101 54286 244 3.959064 9.66011616 Pseudomonadati 3379134 Bacteria Bacteria 91.7 7.890000000000001e-21   NR WP_144303854.1 54767 g53984 i0 58.2 11.7786885245902 79 33 97.1 0 243 7 83 161 WP_144303854.1 NAD(P)H:quinone oxidoreductase [Oceanidesulfovibrio indonesiensis] diamond 2874 92 0.996739130434783 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Oceanidesulfovibrio Oceanidesulfovibrio indonesiensis
28311576 28311576 PRJNA594101_S_NODE_47826_length_253_cov_1.438889_g47524_i0 PRJNA594101 47826 253 1.438889 3.64038917 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 75.1 1.64e-13   NR HAO22905.1 2049433 g47524 i0 39.8 0.984189723320158 83 49 98.4 1 3 251 373 454 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 249 75.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28532651 28532651 PRJNA594101_S_NODE_1847_length_1120_cov_3.334288_g1674_i0 PRJNA594101 1847 1120 3.334288 37.3440256 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 220 3.56e-62   NR HAO22905.1 2049433 g1674 i0 34.5 0.883928571428571 330 198 83.6 4 2 937 225 554 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 990 220 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28722053 28722053 PRJNA594101_S_NODE_5667_length_682_cov_5.044335_g5380_i0 PRJNA594101 5667 682 5.044335 34.4023647 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 245 9.81e-74   NR HAO22905.1 2049433 g5380 i0 49.5 0.950146627565982 216 108 94.6 1 36 680 275 490 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 648 245 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28735370 28735370 PRJNA594101_S_NODE_19847_length_376_cov_1.531353_g19545_i0 PRJNA594101 19847 376 1.531353 5.75788728 Bacteria 2 Bacteria Bacteria 119 6.12e-30   NR MDR3362730.1 885 g19545 i0 48.3 8.49734042553191 120 62 95.7 0 12 371 182 301 MDR3362730.1 D-2-hydroxyacid dehydrogenase [Desulfovibrio sp.] diamond 3195 120 0.991666666666667 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
28911079 28911079 PRJNA594101_S_NODE_41288_length_271_cov_1.429293_g40986_i0 PRJNA594101 41288 271 1.429293 3.87338403 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 75.9 1.19e-13   NR MEW6530735.1 2202153 g40986 i0 49.3 1.52767527675277 69 34 75.3 1 64 267 596 664 MEW6530735.1 AAA domain-containing protein [Thermodesulfobacteriota bacterium] diamond 414 75.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29290235 29290235 PRJNA594101_S_NODE_49_length_3923_cov_11.790909_g27_i2 PRJNA594101 49 3923 11.790909 462.55736007 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.9 0.00114   NR GJM17643.1 2202153 g27 i2 25.6 0.167473872036707 219 140 16.1 7 1742 1110 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 657 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29335275 29335275 PRJNA594101_S_NODE_30909_length_308_cov_2.638298_g30607_i0 PRJNA594101 30909 308 2.638298 8.12595784 Pseudomonadati 3379134 Bacteria Bacteria 47.8 0.00129   NR HHB75666.1 895 g30607 i0 35.3 4.66558441558442 102 59 97.4 4 304 5 119 215 HHB75666.1 cyclic nucleotide-binding domain-containing protein [Desulfobulbus sp.] diamond 1437 47.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus sp.
29385145 29385145 PRJNA594101_S_NODE_7589_length_593_cov_3.319231_g7290_i0 PRJNA594101 7589 593 3.319231 19.68303983 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 202 9.21e-58   NR HAO22905.1 2049433 g7290 i0 46 1.00168634064081 198 106 99.7 1 593 3 293 490 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 594 202 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
29447881 29447881 PRJNA594101_S_NODE_12710_length_463_cov_1.566667_g12408_i0 PRJNA594101 12710 463 1.566667 7.25366821 Desulfobacterales bacterium 2044940 Bacteria Bacteria 46.2 0.0211   NR NVM23245.1 2044940 g12408 i0 38 0.920086393088553 71 41 44.7 2 44 250 549 618 NVM23245.1 chloride channel protein [Desulfobacterales bacterium] diamond 426 46.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
29985033 29985033 PRJNA594101_S_NODE_46331_length_257_cov_1.255435_g46029_i0 PRJNA594101 46331 257 1.255435 3.22646795 Desulfobulbus propionicus 894 Bacteria Bacteria 54.3 3.59e-6   NR WP_015724966.1 894 g46029 i0 37.2 0.910505836575875 78 47 91.1 2 17 250 47 122 WP_015724966.1 AmpG family muropeptide MFS transporter [Desulfobulbus propionicus] diamond 234 54.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus propionicus
30269632 30269632 PRJNA594101_S_NODE_54212_length_245_cov_0.895349_g53910_i0 PRJNA594101 54212 245 0.895349 2.19360505 Desulfarculus sp. 2093367 Bacteria Bacteria 51.2 3.79e-5   NR MBI5522184.1 2093367 g53910 i0 49.4 0.942857142857143 77 35 94.3 2 9 239 213 285 MBI5522184.1 ABC transporter substrate-binding protein [Desulfarculus sp.] diamond 231 51.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfarculia Desulfarculales Desulfarculaceae Desulfarculus Desulfarculus sp.
30490573 30490573 PRJNA594101_S_NODE_43693_length_264_cov_1.382199_g43391_i0 PRJNA594101 43693 264 1.382199 3.64900536 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 97.4 2.72e-21   NR HAO22905.1 2049433 g43391 i0 50 0.977272727272727 86 40 95.5 2 8 259 99 183 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 258 97.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
30585128 30585128 PRJNA594101_S_NODE_44913_length_261_cov_1.015957_g44611_i0 PRJNA594101 44913 261 1.015957 2.65164777 Geobacteraceae bacterium 2282154 Bacteria Bacteria 48.5 1.47e-4   NR HEY6873350.1 2282154 g44611 i0 33.3 0.827586206896552 72 47 82.8 1 3 218 76 146 HEY6873350.1 thioredoxin domain-containing protein [Geobacteraceae bacterium] diamond 216 48.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
30996138 30996138 PRJNA594101_S_NODE_5814_length_674_cov_9.054908_g5525_i0 PRJNA594101 5814 674 9.054908 61.03007992 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 208 1.96e-64   NR MBG0776896.1 2049043 g5525 i0 52.8 5.24777448071217 193 91 85.9 0 668 90 7 199 MBG0776896.1 NAD(P)H:quinone oxidoreductase [Desulfovibrionaceae bacterium] diamond 3537 208 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
31388929 31388929 PRJNA594101_S_NODE_6016_length_664_cov_4.864636_g5727_i0 PRJNA594101 6016 664 4.864636 32.30118304 Pseudomonadati 3379134 Bacteria Bacteria 59.7 6.19e-7   NR WP_319405197.1 218289 g5727 i0 47.5 2.33584337349398 59 29 26.7 1 306 130 142 198 WP_319405197.1 SOUL family heme-binding protein [uncultured Desulfosarcina sp.] diamond 1551 60.1 0.993344425956739 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina uncultured Desulfosarcina sp.
31483896 31483896 PRJNA594101_S_NODE_51376_length_248_cov_0.880000_g51074_i0 PRJNA594101 51376 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 44.7 0.00837   NR WP_035242196.1 34031 g51074 i0 40.7 2.87903225806452 59 34 70.2 1 235 62 135 193 WP_035242196.1 cation-translocating P-type ATPase [Desulfobacter vibrioformis] diamond 714 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter Desulfobacter vibrioformis
31818108 31818108 PRJNA594101_S_NODE_37_length_4389_cov_12.588044_g27_i0 PRJNA594101 37 4389 12.588044 552.48925116 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.9 0.0013   NR GJM17643.1 2202153 g27 i0 25.6 0.149692412850308 219 140 14.4 7 2208 1576 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 657 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31849759 31849759 PRJNA594101_S_NODE_57_length_3815_cov_13.331908_g27_i3 PRJNA594101 57 3815 13.331908 508.6122902 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.9 0.00111   NR GJM17643.1 2202153 g27 i3 25.6 0.17221494102228 219 140 16.6 7 2182 2814 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 657 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32008007 32008007 PRJNA594101_S_NODE_1138_length_1351_cov_3.976526_g1015_i0 PRJNA594101 1138 1351 3.976526 53.72286626 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 75.9 9.88e-12   NR GJM17643.1 2202153 g1015 i0 29.5 0.488527017024426 220 134 46.9 7 663 1295 5 212 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 660 75.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32008070 32008070 PRJNA594101_S_NODE_7738_length_588_cov_1.297087_g7439_i0 PRJNA594101 7738 588 1.297087 7.62687156 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 59.7 1.25e-6   NR HAO22905.1 2049433 g7439 i0 25.4 0.88265306122449 173 123 87.8 4 8 523 401 568 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 519 59.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32387675 32387675 PRJNA594101_S_NODE_2639_length_967_cov_5.187919_g2428_i0 PRJNA594101 2639 967 5.187919 50.16717673 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 212 7.9e-60   NR HAO22905.1 2049433 g2428 i0 34.8 0.936918304033092 302 191 92.1 3 935 45 274 574 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 906 212 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32514551 32514551 PRJNA594101_S_NODE_35159_length_292_cov_1.054795_g34857_i0 PRJNA594101 35159 292 1.054795 3.0800014 Syntrophaceae bacterium PtaB.Bin 2052184 Bacteria Bacteria 78.6 1.19e-15   NR OPY08960.1 1811716 g34857 i0 45.7 1.77739726027397 92 48 92.5 2 10 279 19 110 OPY08960.1 MAG: Outer membrane lipoprotein Blc precursor [Syntrophaceae bacterium PtaB.Bin038] diamond 519 78.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium PtaB.Bin038
32671856 32671856 PRJNA594101_S_NODE_40_length_4281_cov_13.978850_g27_i1 PRJNA594101 40 4281 13.97885 598.4345685 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.9 0.00126   NR GJM17643.1 2202153 g27 i1 25.6 0.153468815697267 219 140 14.8 7 2182 2814 10 213 GJM17643.1 MAG: hypothetical protein DHS20C13_29700 [Thermodesulfobacteriota bacterium] diamond 657 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;