RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA594101" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA594101 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29668781 29668781 PRJNA594101_S_NODE_31210_length_307_cov_1.611111_g30908_i0 PRJNA594101 31210 307 1.611111 4.94611077 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 2.85e-16   NR MDR3547508.1 2053589 g30908 i0 42.6 0.9185667752443 94 52 91.9 1 306 25 45 136 MDR3547508.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 282 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29890349 29890349 PRJNA594101_S_NODE_17371_length_399_cov_1.877301_g17069_i0 PRJNA594101 17371 399 1.877301 7.49043099 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.036   NR MDR3549104.1 2053589 g17069 i0 50 0.285714285714286 38 19 28.6 0 266 153 68 105 MDR3549104.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 114 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30047999 30047999 PRJNA594101_S_NODE_58831_length_228_cov_3.361290_g58529_i0 PRJNA594101 58831 228 3.36129 7.6637412 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.1 4.37e-6   NR MDR3582331.1 2053589 g58529 i0 40.8 2.85526315789474 76 38 92.1 2 17 226 78 152 MDR3582331.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 651 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30205896 30205896 PRJNA594101_S_NODE_38492_length_280_cov_1.376812_g38190_i0 PRJNA594101 38492 280 1.376812 3.8550736 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.8 1.55e-5   NR MDR3549098.1 2053589 g38190 i0 33 3.61071428571429 91 59 95.4 1 2 268 198 288 MDR3549098.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1011 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30553562 30553562 PRJNA594101_S_NODE_5033_length_720_cov_5.476043_g4756_i0 PRJNA594101 5033 720 5.476043 39.4275096 Minisyncoccota bacterium 2053589 Bacteria Bacteria 142 2.28e-39   NR MDR3549538.1 2053589 g4756 i0 67.4 0.395833333333333 95 31 39.6 0 32 316 11 105 MDR3549538.1 small nuclear ribonucleoprotein Sm D2 [Candidatus Paceibacterota bacterium] diamond 285 142 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30996104 30996104 PRJNA594101_S_NODE_32854_length_300_cov_2.920705_g32552_i0 PRJNA594101 32854 300 2.920705 8.762115 Minisyncoccota bacterium 2053589 Bacteria Bacteria 108 6.38e-29   NR HRH31009.1 2053589 g32552 i0 78.5 0.65 65 14 65 0 232 38 1 65 HRH31009.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 195 108 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32102848 32102848 PRJNA594101_S_NODE_20818_length_368_cov_1.118644_g20516_i0 PRJNA594101 20818 368 1.118644 4.11660992 Minisyncoccota bacterium 2053589 Bacteria Bacteria 67.4 3.63e-10   NR MDR3548749.1 2053589 g20516 i0 27 0.904891304347826 111 79 88.9 1 365 39 114 224 MDR3548749.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 333 67.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32229688 32229688 PRJNA594101_S_NODE_46758_length_256_cov_1.027322_g46456_i0 PRJNA594101 46758 256 1.027322 2.62994432 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.6 2.46e-12   NR MDR3581698.1 2053589 g46456 i0 43.1 0.84375 72 41 84.4 0 246 31 11 82 MDR3581698.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 216 71.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32546084 32546084 PRJNA594101_S_NODE_34299_length_295_cov_1.040541_g33997_i0 PRJNA594101 34299 295 1.040541 3.06959595 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.7 6.51e-8   NR MDR3547561.1 2053589 g33997 i0 34.4 0.945762711864407 93 59 92.5 1 295 23 119 211 MDR3547561.1 ion transporter [Candidatus Paceibacterota bacterium] diamond 279 59.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;