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contig_metadata

38 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 38 ✖

bioproject 1

  • PRJNA591127 · 38 ✖

analysis 1

  • diamond · 38 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3115889 3115889 PRJNA591127_P_NODE_10803_length_224_cov_1.315508_g10635_i0 PRJNA591127 10803 224 1.315508 2.94673792 archaeon 1906665 Archaea Archaea 119 1.17e-32   NR RYG58869.1 1906665 g10635 i0 78.4 1.98214285714286 74 16 99.1 0 3 224 27 100 RYG58869.1 MAG: 50S ribosomal protein L6 [archaeon] diamond 444 119 1 Archaea               archaeon
12044186 12044186 PRJNA591127_P_NODE_23170_length_180_cov_1.601399_g23001_i0 PRJNA591127 23170 180 1.601399 2.8825182 archaeon 1906665 Archaea Archaea 92.4 3.55e-20   NR RYY38129.1 1906665 g23001 i0 72.4 3.86666666666667 58 16 96.7 0 179 6 119 176 RYY38129.1 MAG: citrate (Si)-synthase, eukaryotic [archaeon] diamond 696 92.4 1 Archaea               archaeon
26763174 26763174 PRJNA591127_P_NODE_17421_length_197_cov_2.493750_g17252_i0 PRJNA591127 17421 197 2.49375 4.9126875 Natronosalvus halobius 2953746 Archaea Archaea 75.1 7.96e-14   NR WP_253437457.1 2953746 g17252 i0 71 0.944162436548223 62 9 94.4 1 10 195 458 510 WP_253437457.1 DEAD/DEAH box helicase family protein [Natronosalvus halobius] diamond 186 75.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus halobius
27016335 27016335 PRJNA591127_P_NODE_29422_length_151_cov_3.938596_g29253_i0 PRJNA591127 29422 151 3.938596 5.94727996 archaeon 1906665 Archaea Archaea 45.4 0.00115   NR NCQ51453.1 1906665 g29253 i0 79.2 0.47682119205298 24 5 47.7 0 78 149 694 717 NCQ51453.1 UvrD-helicase domain-containing protein [archaeon] diamond 72 45.4 1 Archaea               archaeon
27174303 27174303 PRJNA591127_P_NODE_23342_length_179_cov_1.373239_g23173_i0 PRJNA591127 23342 179 1.373239 2.45809781 archaeon 1906665 Archaea Archaea 105 2.73e-28   NR RYY71006.1 1906665 g23173 i0 94.5 0.921787709497207 55 3 92.2 0 166 2 1 55 RYY71006.1 MAG: hypothetical protein EON63_22075 [archaeon] diamond 165 105 1 Archaea               archaeon
27364497 27364497 PRJNA591127_P_NODE_23343_length_179_cov_1.373239_g23174_i0 PRJNA591127 23343 179 1.373239 2.45809781 archaeon 1906665 Archaea Archaea 73.2 7.37e-15   NR RYY73917.1 1906665 g23174 i0 76.9 0.871508379888268 52 11 87.2 1 178 23 24 74 RYY73917.1 MAG: 50S ribosomal protein P1 [archaeon] diamond 156 73.2 1 Archaea               archaeon
27427566 27427566 PRJNA591127_P_NODE_22183_length_187_cov_1.286667_g22014_i0 PRJNA591127 22183 187 1.286667 2.40606729 archaeon 1906665 Archaea Archaea 116 1.4399999999999999e-32   NR RYG69077.1 1906665 g22014 i0 93 0.914438502673797 57 4 91.4 0 180 10 7 63 RYG69077.1 MAG: hypothetical protein EON64_03615 [archaeon] diamond 171 116 1 Archaea               archaeon
27427571 27427571 PRJNA591127_P_NODE_7743_length_265_cov_1.131579_g7575_i0 PRJNA591127 7743 265 1.131579 2.99868435 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 44.3 0.0145   NR MBD3163584.1 2026803 g7575 i0 33.7 0.939622641509434 83 43 80.4 3 259 47 714 796 MBD3163584.1 PKD domain-containing protein [Candidatus Woesearchaeota archaeon] diamond 249 44.3 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
27459078 27459078 PRJNA591127_P_NODE_12763_length_206_cov_1.372781_g12594_i0 PRJNA591127 12763 206 1.372781 2.82792886 archaeon 1906665 Archaea Archaea 127 3.36e-36   NR RYH06909.1 1906665 g12594 i0 88.2 0.990291262135922 68 8 99 0 204 1 3 70 RYH06909.1 MAG: hypothetical protein EON65_42315 [archaeon] diamond 204 127 1 Archaea               archaeon
27964061 27964061 PRJNA591127_P_NODE_32085_length_150_cov_2.628319_g31916_i0 PRJNA591127 32085 150 2.628319 3.9424785 Nitrososphaerota archaeon 2026795 Archaea Archaea 52.4 3.64e-6   NR NDB88320.1 2026795 g31916 i0 60 1.1 55 12 92 3 11 148 29 82 NDB88320.1 NAD-dependent epimerase/dehydratase family protein [Nitrososphaerota archaeon] diamond 165 52.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28167095 28167095 PRJNA591127_P_NODE_19365_length_197_cov_2.012500_g19196_i0 PRJNA591127 19365 197 2.0125 3.964625 root 1 Root_unresolved Root_unresolved 52.4 8.04e-6   NR MFH1591333.1 1906665 g19196 i0 44.6 15.8984771573604 65 24 99 1 1 195 528 580 MFH1591333.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [archaeon] diamond 3132 52.4 1 Archaea               archaeon
28279632 28279632 PRJNA591127_P_NODE_26446_length_161_cov_1.451613_g26277_i0 PRJNA591127 26446 161 1.451613 2.33709693 archaeon 1906665 Archaea Archaea 98.2 2.4099999999999998e-24   NR RYG68742.1 1906665 g26277 i0 79.2 0.987577639751553 53 11 98.8 0 160 2 5 57 RYG68742.1 MAG: hypothetical protein EON64_04505 [archaeon] diamond 159 98.2 1 Archaea               archaeon
28311490 28311490 PRJNA591127_P_NODE_12626_length_207_cov_2.135294_g12457_i0 PRJNA591127 12626 207 2.135294 4.42005858 archaeon 1906665 Archaea Archaea 85.9 1.45e-17   NR MDP1728662.1 1906665 g12457 i0 59.7 1.97101449275362 67 27 97.1 0 202 2 312 378 MDP1728662.1 LAGLIDADG family homing endonuclease [archaeon] diamond 408 85.9 1 Archaea               archaeon
28532615 28532615 PRJNA591127_P_NODE_6607_length_286_cov_6.192771_g6439_i0 PRJNA591127 6607 286 6.192771 17.71132506 archaeon 1906665 Archaea Archaea 61.2 1.26e-8   NR MCQ2821136.1 1906665 g6439 i0 58 1.51048951048951 69 29 72.4 0 71 277 24 92 MCQ2821136.1 hypothetical protein [archaeon] diamond 432 61.2 1 Archaea               archaeon
28816333 28816333 PRJNA591127_P_NODE_25208_length_167_cov_3.346154_g25039_i0 PRJNA591127 25208 167 3.346154 5.58807718 archaeon 1906665 Archaea Archaea 40.4 0.0135   NR RYY85952.1 1906665 g25039 i0 83.3 0.431137724550898 24 4 43.1 0 1 72 40 63 RYY85952.1 MAG: hypothetical protein EON63_06610 [archaeon] diamond 72 40.4 1 Archaea               archaeon
29037855 29037855 PRJNA591127_P_NODE_8828_length_247_cov_13.776190_g8660_i0 PRJNA591127 8828 247 13.77619 34.0271893 Aigarchaeota archaeon 2528703 Archaea Archaea 43.1 0.0288   NR MCS7143328.1 2528703 g8660 i0 41.4 0.704453441295547 58 33 69.2 1 240 70 420 477 MCS7143328.1 helix-turn-helix domain-containing protein [Aigarchaeota archaeon] diamond 174 43.1 1 Archaea   Thermoproteati Nitrososphaerota         Aigarchaeota archaeon
29100839 29100839 PRJNA591127_P_NODE_31448_length_150_cov_4.300885_g31279_i0 PRJNA591127 31448 150 4.300885 6.4513275 archaeon 1906665 Archaea Archaea 72.8 2e-13   NR NCQ51774.1 1906665 g31279 i0 56.7 1.2 60 14 96 1 6 149 115 174 NCQ51774.1 DUF475 domain-containing protein [archaeon] diamond 180 72.8 1 Archaea               archaeon
29447847 29447847 PRJNA591127_P_NODE_17110_length_197_cov_2.593750_g16941_i0 PRJNA591127 17110 197 2.59375 5.1096875 archaeon 1906665 Archaea Archaea 52.8 5.05e-6   NR RYG52156.1 1906665 g16941 i0 52.9 1.5989847715736 51 9 77.7 1 3 155 16 51 RYG52156.1 MAG: hypothetical protein EON67_01835 [archaeon] diamond 315 52.8 1 Archaea               archaeon
29637151 29637151 PRJNA591127_P_NODE_27310_length_157_cov_1.466667_g27141_i0 PRJNA591127 27310 157 1.466667 2.30266719 archaeon 1906665 Archaea Archaea 73.2 5.5e-15   NR RYH29492.1 1906665 g27141 i0 81.6 0.936305732484076 49 9 93.6 0 147 1 11 59 RYH29492.1 MAG: 50S ribosomal protein L30e [archaeon] diamond 147 73.2 1 Archaea               archaeon
29840431 29840431 PRJNA591127_P_NODE_30391_length_151_cov_2.903509_g30222_i0 PRJNA591127 30391 151 2.903509 4.38429859 Methanomassiliicoccus 1080709 Archaea Archaea 57.8 5.27e-8   NR WP_026068762.1 1080712 g30222 i0 100 1.49006622516556 25 0 49.7 0 150 76 328 352 WP_026068762.1 coenzyme-B sulfoethylthiotransferase subunit beta [Methanomassiliicoccus luminyensis] diamond 225 57.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Methanomassiliicoccus Methanomassiliicoccus luminyensis
30016617 30016617 PRJNA591127_P_NODE_17991_length_197_cov_2.337500_g17822_i0 PRJNA591127 17991 197 2.3375 4.604875 archaeon 1906665 Archaea Archaea 50.4 8.58e-6   NR NCQ52135.1 1906665 g17822 i0 95.8 0.365482233502538 24 1 36.5 0 124 195 10 33 NCQ52135.1 acyl-CoA thioesterase [archaeon] diamond 72 50.4 1 Archaea               archaeon
30111259 30111259 PRJNA591127_P_NODE_25332_length_167_cov_0.869231_g25163_i0 PRJNA591127 25332 167 0.869231 1.45161577 archaeon 1906665 Archaea Archaea 95.5 7.989999999999999e-23   NR RYH30351.1 1906665 g25163 i0 82.4 0.916167664670659 51 9 91.6 0 15 167 2 52 RYH30351.1 MAG: hypothetical protein EON65_05485 [archaeon] diamond 153 95.5 1 Archaea               archaeon
30142544 30142544 PRJNA591127_P_NODE_25772_length_164_cov_2.984252_g25603_i0 PRJNA591127 25772 164 2.984252 4.89417328 Hadesarchaea archaeon 2250276 Archaea Archaea 48.9 1.03e-5   NR MCS7131446.1 2250276 g25603 i0 46.3 0.98780487804878 54 28 98.8 1 1 162 19 71 MCS7131446.1 50S ribosomal protein L34e [Hadesarchaea archaeon] diamond 162 48.9 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia       Hadesarchaea archaeon
30205807 30205807 PRJNA591127_P_NODE_18532_length_197_cov_2.193750_g18363_i0 PRJNA591127 18532 197 2.19375 4.3216875 archaeon 1906665 Archaea Archaea 58.5 5.43e-8   NR NCQ51453.1 1906665 g18363 i0 53.7 1.02030456852792 67 28 97.5 1 192 1 842 908 NCQ51453.1 UvrD-helicase domain-containing protein [archaeon] diamond 201 58.5 1 Archaea               archaeon
30332935 30332935 PRJNA591127_P_NODE_31352_length_150_cov_4.699115_g31183_i0 PRJNA591127 31352 150 4.699115 7.0486725 archaeon 1906665 Archaea Archaea 45.1 0.00153   NR NCP98468.1 1906665 g31183 i0 42.9 0.84 42 24 84 0 24 149 25 66 NCP98468.1 hypothetical protein [archaeon] diamond 126 45.1 1 Archaea               archaeon
30616718 30616718 PRJNA591127_P_NODE_9993_length_233_cov_1.193878_g9825_i0 PRJNA591127 9993 233 1.193878 2.78173574 archaeon 1906665 Archaea Archaea 61.2 4.56e-10   NR RYH00022.1 1906665 g9825 i0 63.1 0.836909871244635 65 24 83.7 0 225 31 34 98 RYH00022.1 MAG: hypothetical protein EON65_49750 [archaeon] diamond 195 61.2 1 Archaea               archaeon
31121985 31121985 PRJNA591127_P_NODE_6595_length_287_cov_1.396000_g6427_i0 PRJNA591127 6595 287 1.396 4.00652 archaeon 1906665 Archaea Archaea 134 3.57e-36   NR RYH04926.1 1906665 g6427 i0 69.2 1.93379790940767 91 28 95.1 0 282 10 189 279 RYH04926.1 MAG: 50S ribosomal protein L10, partial [archaeon] diamond 555 134 1 Archaea               archaeon
31280345 31280345 PRJNA591127_P_NODE_5815_length_304_cov_1.292135_g5647_i0 PRJNA591127 5815 304 1.292135 3.9280904 archaeon 1906665 Archaea Archaea 103 2.87e-26   NR RYH30520.1 1906665 g5647 i0 69.9 0.720394736842105 73 22 72 0 302 84 21 93 RYH30520.1 MAG: ribosomal L7Ae/L30e/S12e/Gadd45 family protein [archaeon] diamond 219 103 1 Archaea               archaeon
31786295 31786295 PRJNA591127_P_NODE_20657_length_196_cov_3.069182_g20488_i0 PRJNA591127 20657 196 3.069182 6.01559672 Methanobacterium sp. 2164 Archaea Archaea 45.1 0.00266   NR MDD1775483.1 2164 g20488 i0 76 0.75 25 6 38.3 0 75 1 79 103 MDD1775483.1 CPBP family intramembrane metalloprotease [Methanobacterium sp.] diamond 147 45.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31831376 31831376 PRJNA591127_P_NODE_14237_length_197_cov_4.643750_g14068_i0 PRJNA591127 14237 197 4.64375 9.1481875 Halalkalicoccus 332246 Archaea Archaea 58.9 3.7e-8   NR WP_066383698.1 1008153 g14068 i0 92 1.52284263959391 25 2 38.1 0 2 76 125 149 WP_066383698.1 DUF354 domain-containing protein [Halalkalicoccus paucihalophilus] diamond 300 58.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus paucihalophilus
31913004 31913004 PRJNA591127_P_NODE_14617_length_197_cov_4.018750_g14448_i0 PRJNA591127 14617 197 4.01875 7.9169375 archaeon 1906665 Archaea Archaea 43.9 0.00115   NR NCQ52258.1 1906665 g14448 i0 75 0.365482233502538 24 6 36.5 0 3 74 39 62 NCQ52258.1 hypothetical protein [archaeon] diamond 72 43.9 1 Archaea               archaeon
31944468 31944468 PRJNA591127_P_NODE_20777_length_196_cov_1.716981_g20608_i0 PRJNA591127 20777 196 1.716981 3.36528276 archaeon 1906665 Archaea Archaea 87 5.89e-19   NR RYH18875.1 1906665 g20608 i0 70.8 0.994897959183674 65 19 99.5 0 195 1 103 167 RYH18875.1 MAG: hypothetical protein EON65_26770 [archaeon] diamond 195 87 1 Archaea               archaeon
32229606 32229606 PRJNA591127_P_NODE_21838_length_189_cov_3.598684_g21669_i0 PRJNA591127 21838 189 3.598684 6.80151276 archaeon 1906665 Archaea Archaea 113 1.28e-29   NR RYH30351.1 1906665 g21669 i0 71 1.96825396825397 62 18 98.4 0 2 187 85 146 RYH30351.1 MAG: hypothetical protein EON65_05485 [archaeon] diamond 372 113 1 Archaea               archaeon
32229611 32229611 PRJNA591127_P_NODE_4278_length_351_cov_2.375796_g4110_i0 PRJNA591127 4278 351 2.375796 8.33904396 archaeon 1906665 Archaea Archaea 96.7 7.07e-24   NR RYH07632.1 1906665 g4110 i0 77.8 0.923076923076923 54 12 46.2 0 7 168 1 54 RYH07632.1 MAG: 30S ribosomal protein S27ae [archaeon] diamond 324 96.7 1 Archaea               archaeon
32419358 32419358 PRJNA591127_P_NODE_21159_length_194_cov_1.732484_g20990_i0 PRJNA591127 21159 194 1.732484 3.36101896 archaeon 1906665 Archaea Archaea 121 2.98e-34   NR RYY77943.1 1906665 g20990 i0 87.5 0.989690721649485 64 8 99 0 1 192 8 71 RYY77943.1 MAG: 30S ribosomal protein S17 [archaeon] diamond 192 121 1 Archaea               archaeon
32514482 32514482 PRJNA591127_P_NODE_25459_length_166_cov_1.798450_g25290_i0 PRJNA591127 25459 166 1.79845 2.985427 archaeon 1906665 Archaea Archaea 94.4 4.9e-21   NR RYG65165.1 1906665 g25290 i0 85.2 0.975903614457831 54 8 97.6 0 3 164 124 177 RYG65165.1 MAG: ABC-F family ATP-binding cassette domain-containing protein [archaeon] diamond 162 94.4 1 Archaea               archaeon
32546031 32546031 PRJNA591127_P_NODE_21359_length_193_cov_0.993590_g21190_i0 PRJNA591127 21359 193 0.99359 1.9176287 archaeon 1906665 Archaea Archaea 74.3 8.01e-15   NR RYH30350.1 1906665 g21190 i0 62.5 1.98963730569948 64 21 99.5 1 2 193 17 77 RYH30350.1 MAG: hypothetical protein EON65_05480 [archaeon] diamond 384 74.3 1 Archaea               archaeon
32766255 32766255 PRJNA591127_P_NODE_7520_length_268_cov_4.000000_g7352_i0 PRJNA591127 7520 268 4 10.72 archaeon 1906665 Archaea Archaea 57.4 1.3e-7   NR NCQ51789.1 1906665 g7352 i0 33.8 1.48880597014925 133 21 73.9 1 206 9 1 133 NCQ51789.1 hypothetical protein [archaeon] diamond 399 57.4 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;