RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29037848 29037848 PRJNA591127_P_NODE_22508_length_184_cov_3.897959_g22339_i0 PRJNA591127 22508 184 3.897959 7.17224456 Sycon ciliatum 27933 Porifera other_Eukaryota 96.3 7.4e-22   NR CCQ18610.1 27933 g22339 i0 80.3 2.98369565217391 61 12 99.5 0 183 1 180 240 CCQ18610.1 ribosomal protein RPL1/RPL2/RL4L4 [Sycon ciliatum] diamond 549 96.3 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
32766252 32766252 PRJNA591127_P_NODE_24820_length_169_cov_4.340909_g24651_i0 PRJNA591127 24820 169 4.340909 7.33613621 Hymeniacidon perlevis 177573 Porifera other_Eukaryota 72 5.54e-14   NR ABO26247.1 177573 g24651 i0 65.4 0.923076923076923 52 18 92.3 0 156 1 62 113 ABO26247.1 14-3-3 K, partial [Hymeniacidon perlevis] diamond 156 72 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Hymeniacidon Hymeniacidon perlevis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;