contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_phylum = "Chlorophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29271866 | 29271866 | PRJNA591127_P_NODE_24809_length_169_cov_4.863636_g24640_i0 | PRJNA591127 | 24809 | 169 | 4.863636 | 8.21954484 | Eukaryota | 2759 | Plants | Plants | 65.1 | 3.76e-11 | NR | KAI8114419.1 | 2696299 | g24640 | i0 | 75.7 | 4.63313609467456 | 37 | 9 | 65.7 | 0 | 167 | 57 | 151 | 187 | KAI8114419.1 hypothetical protein M9434_002543 [Picochlorum sp. BPE23] | diamond | 783 | 65.5 | 0.993893129770992 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Picochlorum | Picochlorum sp. BPE23 | |||
| 30092954 | 30092954 | PRJNA591127_P_NODE_12572_length_207_cov_4.417647_g12403_i0 | PRJNA591127 | 12572 | 207 | 4.417647 | 9.14452929 | Eukaryota | 2759 | Plants | Plants | 80.1 | 2.43e-16 | NR | CAL5222236.1 | 1274662 | g12403 | i0 | 70.5 | 12.3478260869565 | 61 | 17 | 88.4 | 1 | 25 | 207 | 62 | 121 | CAL5222236.1 g4570 [Coccomyxa viridis] | diamond | 2556 | 80.5 | 0.995031055900621 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 30472413 | 30472413 | PRJNA591127_P_NODE_27193_length_157_cov_4.041667_g27024_i0 | PRJNA591127 | 27193 | 157 | 4.041667 | 6.34541719 | Eukaryota | 2759 | Plants | Plants | 82.4 | 6.2e-17 | NR | CAA87751.1 | 3161 | g27024 | i0 | 74 | 34.9299363057325 | 50 | 13 | 95.5 | 0 | 3 | 152 | 7 | 56 | CAA87751.1 Apocytochrome b [Tetraselmis subcordiformis] | diamond | 5484 | 82.8 | 0.995169082125604 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorodendrophyceae | Chlorodendrales | Chlorodendraceae | Tetraselmis | Tetraselmis subcordiformis | |
| 32546032 | 32546032 | PRJNA591127_P_NODE_23079_length_180_cov_4.972028_g22910_i0 | PRJNA591127 | 23079 | 180 | 4.972028 | 8.9496504 | Bathycoccus prasinos | 41875 | Plants | Plants | 47 | 5.09e-4 | NR | XP_007514567.1 | 41875 | g22910 | i0 | 58.3 | 0.6 | 36 | 15 | 60 | 0 | 68 | 175 | 342 | 377 | XP_007514567.1 predicted protein [Bathycoccus prasinos] | diamond | 108 | 47 | 1 | Eukaryota | Viridiplantae | Chlorophyta | Mamiellophyceae | Mamiellales | Bathycoccaceae | Bathycoccus | Bathycoccus prasinos | ||
| 32811208 | 32811208 | PRJNA591127_P_NODE_22320_length_186_cov_1.322148_g22151_i0 | PRJNA591127 | 22320 | 186 | 1.322148 | 2.45919528 | Opisthokonta | 33154 | Plants | Plants | 59.3 | 1.33e-9 | NR | XP_002499547.1 | 296587 | g22151 | i0 | 67.4 | 4.59677419354839 | 43 | 14 | 69.4 | 0 | 166 | 38 | 52 | 94 | XP_002499547.1 ribosomal protein L37e [Micromonas commoda] | diamond | 855 | 59.7 | 0.993299832495812 | Eukaryota | Viridiplantae | Chlorophyta | Mamiellophyceae | Mamiellales | Mamiellaceae | Micromonas | Micromonas commoda |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;