RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27282895 27282895 PRJNA591127_P_NODE_29323_length_151_cov_4.131579_g29154_i0 PRJNA591127 29323 151 4.131579 6.23868429 Bacteria 2 Bacteria Bacteria 41.6 0.0279   NR WP_309719678.1 1872638 g29154 i0 60 1.98675496688742 25 10 49.7 0 11 85 571 595 WP_309719678.1 DEAD/DEAH box helicase family protein, partial [Armatimonas sp.] diamond 300 41.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32860757 32860757 PRJNA591127_P_NODE_20240_length_197_cov_1.756250_g20071_i0 PRJNA591127 20240 197 1.75625 3.4598125 Armatimonadota bacterium 2033014 Bacteria Bacteria 82 2.89e-16   NR MBI3947599.1 2033014 g20071 i0 63.6 1.00507614213198 66 23 99 1 3 197 384 449 MBI3947599.1 AAA family ATPase [Armatimonadota bacterium] diamond 198 82 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;