RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27964061 27964061 PRJNA591127_P_NODE_32085_length_150_cov_2.628319_g31916_i0 PRJNA591127 32085 150 2.628319 3.9424785 Nitrososphaerota archaeon 2026795 Archaea Archaea 52.4 3.64e-6   NR NDB88320.1 2026795 g31916 i0 60 1.1 55 12 92 3 11 148 29 82 NDB88320.1 NAD-dependent epimerase/dehydratase family protein [Nitrososphaerota archaeon] diamond 165 52.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29037855 29037855 PRJNA591127_P_NODE_8828_length_247_cov_13.776190_g8660_i0 PRJNA591127 8828 247 13.77619 34.0271893 Aigarchaeota archaeon 2528703 Archaea Archaea 43.1 0.0288   NR MCS7143328.1 2528703 g8660 i0 41.4 0.704453441295547 58 33 69.2 1 240 70 420 477 MCS7143328.1 helix-turn-helix domain-containing protein [Aigarchaeota archaeon] diamond 174 43.1 1 Archaea   Thermoproteati Nitrososphaerota         Aigarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;