RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA591127 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24791152 24791152 PRJNA591127_P_NODE_13140_length_203_cov_1.174699_g12971_i0 PRJNA591127 13140 203 1.174699 2.38463897 Bodo saltans 75058 Euglenozoa other_Eukaryota 118 8.18e-33   NR CUG80347.1 75058 g12971 i0 82.1 0.990147783251232 67 12 99 0 3 203 12 78 CUG80347.1 60S ribosomal protein L30, putative [Bodo saltans] diamond 201 118 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28009306 28009306 PRJNA591127_P_NODE_4905_length_329_cov_4.866438_g4737_i0 PRJNA591127 4905 329 4.866438 16.01058102 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 1.13e-34   NR KAJ9469984.1 91374 g4737 i0 55.4 2.01519756838906 112 45 97.6 2 6 326 3 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 663 125 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32007967 32007967 PRJNA591127_P_NODE_24598_length_171_cov_1.044776_g24429_i0 PRJNA591127 24598 171 1.044776 1.78656696 Stygiella incarcerata 1712417 Root_unresolved Root_unresolved 73.6 1.05e-14   NR ANM86218.1 1712417 g24429 i0 68.9 0.789473684210526 45 14 78.9 0 136 2 8 52 ANM86218.1 40S ribosomal protein S18 [Stygiella incarcerata] diamond 135 73.6 1 Eukaryota Discoba       Jakobida Stygiellidae Stygiella Stygiella incarcerata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;