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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA591127" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 11 ✖

bioproject 1

  • PRJNA591127 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26934928 26934928 PRJNA591127_P_NODE_17402_length_197_cov_2.500000_g17233_i0 PRJNA591127 17402 197 2.5 4.925 Bacteria 2 Bacteria Bacteria 46.6 1.99e-4   NR MBP7845841.1 2053589 g17233 i0 75 1.11167512690355 24 6 36.5 0 76 5 37 60 MBP7845841.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 219 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27048128 27048128 PRJNA591127_P_NODE_27882_length_154_cov_3.376068_g27713_i0 PRJNA591127 27882 154 3.376068 5.19914472 Minisyncoccota bacterium 2053589 Bacteria Bacteria 96.3 1.1399999999999999e-23   NR MDR3570669.1 2053589 g27713 i0 90.2 0.993506493506494 51 5 99.4 0 154 2 57 107 MDR3570669.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 153 96.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27079698 27079698 PRJNA591127_P_NODE_22922_length_181_cov_7.243056_g22753_i0 PRJNA591127 22922 181 7.243056 13.10993136 Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_ 2053593 Bacteria Bacteria 42 0.0313   NR PIQ74711.1 1974818 g22753 i0 52.9 0.56353591160221 34 16 56.4 0 80 181 77 110 PIQ74711.1 MAG: elongation factor 4 [Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_0_20_44_10] diamond 102 42 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_0_20_44_10
27616912 27616912 PRJNA591127_P_NODE_29024_length_151_cov_4.736842_g28855_i0 PRJNA591127 29024 151 4.736842 7.15263142 Patescibacteria group bacterium 2052139 Bacteria Bacteria 50.4 2.02e-5   NR MES2971515.1 2052139 g28855 i0 52.9 1.78807947019868 34 16 67.5 0 1 102 359 392 MES2971515.1 S41 family peptidase [Patescibacteria group bacterium] diamond 270 50.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27995776 27995776 PRJNA591127_P_NODE_20205_length_197_cov_1.775000_g20036_i0 PRJNA591127 20205 197 1.775 3.49675 Patescibacteria group bacterium 2052139 Bacteria Bacteria 65.5 1.94e-10   NR MFA6198652.1 2052139 g20036 i0 58.5 0.989847715736041 65 23 99 1 3 197 347 407 MFA6198652.1 hypothetical protein [Patescibacteria group bacterium] diamond 195 65.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28469463 28469463 PRJNA591127_P_NODE_18486_length_197_cov_2.206250_g18317_i0 PRJNA591127 18486 197 2.20625 4.3463125 candidate division WWE3 bacterium RIFCSPHIGHO2_ 2053526 Bacteria Bacteria 55.1 8.98e-7   NR OGC47839.1 1802614 g18317 i0 92 0.380710659898477 25 2 38.1 0 195 121 54 78 OGC47839.1 MAG: hypothetical protein A2713_01270 [candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_35_17] diamond 75 55.1 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium RIFCSPHIGHO2_01_FULL_35_17
28500952 28500952 PRJNA591127_P_NODE_28607_length_151_cov_6.982456_g28438_i0 PRJNA591127 28607 151 6.982456 10.54350856 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.7 4.53e-6   NR MDD3662973.1 2053589 g28438 i0 85.2 1.09271523178808 27 4 53.6 0 148 68 49 75 MDD3662973.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 49.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29479349 29479349 PRJNA591127_P_NODE_7550_length_268_cov_1.350649_g7382_i0 PRJNA591127 7550 268 1.350649 3.61973932 candidate division WWE3 bacterium CSP1-7 1576480 Bacteria Bacteria 48.9 2.43e-5   NR KRT67739.1 1576480 g7382 i0 52.3 0.951492537313433 44 21 49.3 0 40 171 15 58 KRT67739.1 MAG: Uncharacterized protein XU08_C0001G0148 [candidate division WWE3 bacterium CSP1-7] diamond 255 48.9 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium CSP1-7
30743192 30743192 PRJNA591127_P_NODE_24214_length_173_cov_2.286765_g24045_i0 PRJNA591127 24214 173 2.286765 3.95610345 Patescibacteria group bacterium 2052139 Bacteria Bacteria 47.8 1.43e-4   NR MEK7650155.1 2052139 g24045 i0 60.6 1.38728323699422 33 13 57.2 0 153 55 6 38 MEK7650155.1 50S ribosomal protein L6 [Patescibacteria group bacterium] diamond 240 47.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32134603 32134603 PRJNA591127_P_NODE_17458_length_197_cov_2.481250_g17289_i0 PRJNA591127 17458 197 2.48125 4.8880625 Candidatus Microsaccharimonas sossegonensis 2506948 Bacteria Bacteria 52.4 7.96e-6   NR RWZ78033.1 2506948 g17289 i0 100 0.380710659898477 25 0 38.1 0 76 2 119 143 RWZ78033.1 MAG: ISL3 family transposase [Candidatus Microsaccharimonas sossegonensis] diamond 75 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Microsaccharimonas Candidatus Microsaccharimonas sossegonensis
32860759 32860759 PRJNA591127_P_NODE_24000_length_174_cov_6.883212_g23831_i0 PRJNA591127 24000 174 6.883212 11.97678888 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.6 0.0134   NR MDR3570671.1 2053589 g23831 i0 48.4 1.10344827586207 64 26 98.3 2 172 2 35 98 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 41.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;