RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA591000" and tax_phylum = "Candidatus Woykeibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Woykeibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28847987 28847987 PRJNA591000_P_NODE_1668_length_963_cov_4.819058_g1203_i0 PRJNA591000 1668 963 4.819058 46.40752854 Candidatus Woykebacteria bacterium RBG_19FT_COMBO_43_1 2814276 Bacteria Bacteria 367 2.34e-122   NR OGY27566.1 1802598 g1203 i0 67.9 1.89719626168224 305 98 95 0 4 918 116 420 OGY27566.1 MAG: iron transporter [Candidatus Woykebacteria bacterium RBG_19FT_COMBO_43_10] diamond 1827 367 1 Bacteria Bacteria candidate phyla   Candidatus Woykeibacteriota         Candidatus Woykebacteria bacterium RBG_19FT_COMBO_43_10
31185252 31185252 PRJNA591000_P_NODE_3655_length_746_cov_4.114365_g2845_i0 PRJNA591000 3655 746 4.114365 30.6931629 Candidatus Woykebacteria bacterium RBG_13_4 2814276 Bacteria Bacteria 110 8.94e-27   NR OGY22762.1 1802593 g2845 i0 56.6 0.398123324396783 99 43 39.8 0 160 456 9 107 OGY22762.1 MAG: hypothetical protein A2172_03950 [Candidatus Woykebacteria bacterium RBG_13_40_15] diamond 297 110 1 Bacteria Bacteria candidate phyla   Candidatus Woykeibacteriota         Candidatus Woykebacteria bacterium RBG_13_40_15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;