RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA591000" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28847989 28847989 PRJNA591000_P_NODE_6888_length_535_cov_2.345850_g5489_i0 PRJNA591000 6888 535 2.34585 12.5502975 Knufia fluminis 191047 Fungi Fungi 66.6 3.65e-9   NR KAK5952017.1 191047 g5489 i0 31.9 0.807476635514019 144 85 80.7 1 61 492 304 434 KAK5952017.1 hypothetical protein OHC33_006903 [Knufia fluminis] diamond 432 66.6 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Knufia Knufia fluminis
31388896 31388896 PRJNA591000_P_NODE_10256_length_441_cov_1.300971_g8689_i0 PRJNA591000 10256 441 1.300971 5.73728211 Trichomeriaceae 1233474 Fungi Fungi 61.2 1.11e-7   NR XP_064728618.1 1635080 g8689 i0 86.2 0.591836734693878 29 4 19.7 0 88 2 813 841 XP_064728618.1 uncharacterized protein PMZ80_006944 [Knufia obscura] diamond 261 61.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Knufia Knufia obscura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;