RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA591000" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA591000 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27995767 27995767 PRJNA591000_P_NODE_5985_length_588_cov_1.483005_g4723_i0 PRJNA591000 5985 588 1.483005 8.7200694 Chlorovirus sp. 2809302 Viruses Viruses 49.7 0.00363   NR WZO85644.1 2809302 g4723 i0 54.5 0.224489795918367 44 16 22.4 1 135 4 502 541 WZO85644.1 intramolecular chaperone auto-processing domain protein [Chlorovirus sp.] diamond 132 49.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Chlorovirus Chlorovirus sp.
29416361 29416361 PRJNA591000_P_NODE_15489_length_307_cov_3.330935_g13883_i0 PRJNA591000 15489 307 3.330935 10.22597045 Mimivirus AB-566-O17 1988039 Viruses Viruses 70.1 2.05e-11   NR ARR74925.1 1988039 g13883 i0 63.3 1.17263843648208 60 22 58.6 0 300 121 913 972 ARR74925.1 hypothetical protein SAGO17_0005 [Mimivirus AB-566-O17] diamond 360 70.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus AB-566-O17
30648155 30648155 PRJNA591000_P_NODE_3793_length_737_cov_1.485876_g2967_i0 PRJNA591000 3793 737 1.485876 10.95090612 Harvfovirus sp. 2487768 Viruses Viruses 75.1 2.47e-11   NR AYV81261.1 2487768 g2967 i0 59.7 0.757123473541384 62 25 25.2 0 258 73 957 1018 AYV81261.1 MAG: DNA polymerase family B elongation subunit [Harvfovirus sp.] diamond 558 75.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Harvfovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;