contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA588137" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14593606 | 14593606 | PRJNA588137_S_NODE_8072_length_247_cov_0.919540_g8039_i0 | PRJNA588137 | 8072 | 247 | 0.91954 | 2.2712638 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 166 | 1.08e-46 | NR | XP_002672467.1 | 5762 | g8039 | i0 | 89 | 0.995951417004049 | 82 | 9 | 99.6 | 0 | 2 | 247 | 117 | 198 | XP_002672467.1 aldehyde dehydrogenase 2 family [Naegleria gruberi] | diamond | 246 | 166 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 27459071 | 27459071 | PRJNA588137_S_NODE_8343_length_247_cov_0.885057_g8310_i0 | PRJNA588137 | 8343 | 247 | 0.885057 | 2.18609079 | Naegleria fowleri | 5763 | Heterolobosea | other_Eukaryota | 155 | 3.42e-44 | NR | XP_044568978.1 | 5763 | g8310 | i0 | 89.3 | 3.03643724696356 | 84 | 7 | 99.6 | 1 | 247 | 2 | 150 | 233 | XP_044568978.1 uncharacterized protein FDP41_007442 [Naegleria fowleri] | diamond | 750 | 155 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria fowleri | ||||
| 27693682 | 27693682 | PRJNA588137_S_NODE_8904_length_245_cov_2.238372_g8871_i0 | PRJNA588137 | 8904 | 245 | 2.238372 | 5.4840114 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 77.4 | 2.26e-15 | NR | XP_002671268.1 | 5762 | g8871 | i0 | 55.7 | 1.81224489795918 | 79 | 32 | 93.1 | 2 | 15 | 242 | 11 | 89 | XP_002671268.1 uncharacterized protein NAEGRDRAFT_73780 [Naegleria gruberi] | diamond | 444 | 77.4 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 28153737 | 28153737 | PRJNA588137_S_NODE_10205_length_243_cov_0.905882_g10172_i0 | PRJNA588137 | 10205 | 243 | 0.905882 | 2.20129326 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 99 | 8.48e-24 | NR | XP_002681820.1 | 5762 | g10172 | i0 | 66.3 | 0.987654320987654 | 80 | 26 | 98.8 | 1 | 2 | 241 | 26 | 104 | XP_002681820.1 uncharacterized protein NAEGRDRAFT_46187 [Naegleria gruberi] | diamond | 240 | 99 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 28911002 | 28911002 | PRJNA588137_S_NODE_9228_length_245_cov_0.895349_g9195_i0 | PRJNA588137 | 9228 | 245 | 0.895349 | 2.19360505 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 84 | 6.22e-18 | NR | XP_002671057.1 | 5762 | g9195 | i0 | 67.7 | 0.795918367346939 | 65 | 16 | 73.5 | 3 | 244 | 65 | 23 | 87 | XP_002671057.1 uncharacterized protein NAEGRDRAFT_81678 [Naegleria gruberi] | diamond | 195 | 84 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi | ||||
| 31533648 | 31533648 | PRJNA588137_S_NODE_9436_length_244_cov_0.900585_g9403_i0 | PRJNA588137 | 9436 | 244 | 0.900585 | 2.1974274 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 48.1 | 4.81e-4 | NR | CUG07766.1 | 75058 | g9403 | i0 | 39.7 | 0.897540983606557 | 73 | 44 | 89.8 | 0 | 241 | 23 | 669 | 741 | CUG07766.1 Hypothetical protein, putative [Bodo saltans] | diamond | 219 | 48.1 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 32293067 | 32293067 | PRJNA588137_S_NODE_10619_length_242_cov_0.911243_g10586_i0 | PRJNA588137 | 10619 | 242 | 0.911243 | 2.20520806 | Naegleria gruberi | 5762 | Heterolobosea | other_Eukaryota | 117 | 6.79e-29 | NR | XP_002682540.1 | 5762 | g10586 | i0 | 65.5 | 1.04132231404959 | 84 | 24 | 97.9 | 1 | 241 | 5 | 45 | 128 | XP_002682540.1 uncharacterized protein NAEGRDRAFT_78076 [Naegleria gruberi] | diamond | 252 | 117 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Naegleria | Naegleria gruberi |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;