contig_metadata
2 rows where analysis = "diamond", bioproject = "PRJNA588137" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11341861 | 11341861 | PRJNA588137_S_NODE_9129_length_245_cov_0.895349_g9096_i0 | PRJNA588137 | 9129 | 245 | 0.895349 | 2.19360505 | Candidatus Sericytochromatia bacterium | 2762020 | Bacteria | Bacteria | 133 | 3.89e-34 | NR | MEZ0370246.1 | 2762020 | g9096 | i0 | 91.5 | 1.73877551020408 | 71 | 6 | 86.9 | 0 | 1 | 213 | 61 | 131 | MEZ0370246.1 ATP-dependent helicase [Candidatus Sericytochromatia bacterium] | diamond | 426 | 133 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Sericytochromatia | Candidatus Sericytochromatia bacterium | |||||
| 26667908 | 26667908 | PRJNA588137_S_NODE_2761_length_330_cov_0.665370_g2728_i0 | PRJNA588137 | 2761 | 330 | 0.66537 | 2.195721 | Vulcanococcus sp. | 2856995 | Bacteria | Bacteria | 43.5 | 0.049 | NR | WP_296450979.1 | 2856995 | g2728 | i0 | 27.8 | 1.76363636363636 | 97 | 62 | 85.5 | 2 | 22 | 303 | 69 | 160 | WP_296450979.1 tRNA epoxyqueuosine(34) reductase QueG [Vulcanococcus sp.] | diamond | 582 | 43.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Vulcanococcus | Vulcanococcus sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;