RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA577580" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26890052 26890052 PRJNA577580_P_NODE_281_length_1409_cov_11.648952_g250_i0 PRJNA577580 281 1409 11.648952 164.13373368 Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15 1801931 Bacteria Bacteria 46.6 0.0409   NR OGJ71846.1 1801931 g250 i0 50 0.085166784953868 40 20 8.5 0 303 184 89 128 OGJ71846.1 MAG: hypothetical protein A3H22_03880 [Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15] diamond 120 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15
26921472 26921472 PRJNA577580_P_NODE_282_length_1409_cov_11.395958_g250_i1 PRJNA577580 282 1409 11.395958 160.56904822 Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15 1801931 Bacteria Bacteria 46.6 0.0409   NR OGJ71846.1 1801931 g250 i1 50 0.085166784953868 40 20 8.5 0 303 184 89 128 OGJ71846.1 MAG: hypothetical protein A3H22_03880 [Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15] diamond 120 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium RIFCSPLOWO2_12_FULL_55_15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;